RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 PRSS16Q9NQE7 514 aa17.67■□□□□ 0.42
TUBB3-211ENST00000556536 DLGAP2Q9P1A6 1054 aa17.67■□□□□ 0.42
TUBB3-211ENST00000556536 SUN2Q9UH99 717 aa17.67■□□□□ 0.42
TUBB3-211ENST00000556536 MMP17Q9ULZ9 603 aa17.67■□□□□ 0.42
TUBB3-211ENST00000556536 SLC8A2Q9UPR5 921 aa17.67■□□□□ 0.42
TUBB3-211ENST00000556536 ATP8A1Q9Y2Q0 1164 aa17.67■□□□□ 0.42
TUBB3-211ENST00000556536 NUP205Q92621 2012 aa17.67■□□□□ 0.42
TUBB3-211ENST00000556536 CFAP69A5D8W1 941 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 INSIG1O15503 277 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 ZBTB24O43167 697 aaPredicted RBP17.66■□□□□ 0.42
TUBB3-211ENST00000556536 GSRP00390 522 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 ETS1P14921 441 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 AOC1P19801 751 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 GKP32189 559 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 CD68P34810 354 aaPredicted RBP17.66■□□□□ 0.42
TUBB3-211ENST00000556536 CKAP4Q07065 602 aaKnown RBP17.66■□□□□ 0.42
TUBB3-211ENST00000556536 C2orf54Q08AI8 447 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 EOGTQ5NDL2 527 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 CCDC137Q6PK04 289 aaKnown RBP17.66■□□□□ 0.42
TUBB3-211ENST00000556536 TMEM92Q6UXU6 159 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 DPY19L3Q6ZPD9 716 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 BBS5Q8N3I7 341 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.66■□□□□ 0.42
TUBB3-211ENST00000556536 GLIS1Q8NBF1 620 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 CHST14Q8NCH0 376 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 OR2AP1Q8NGE2 309 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 CCDC110Q8TBZ0 833 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 VOPP1Q96AW1 172 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 RTP4Q96DX8 246 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 CCDC114Q96M63 670 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 CD248Q9HCU0 757 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 KLHL8Q9P2G9 620 aaPredicted RBP17.66■□□□□ 0.42
TUBB3-211ENST00000556536 TTLL3Q9Y4R7 772 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 CACNA1HO95180 2353 aa17.66■□□□□ 0.42
TUBB3-211ENST00000556536 TARSL2A2RTX5 802 aaKnown RBP17.65■□□□□ 0.42
TUBB3-211ENST00000556536 C5orf60A6NFR6 353 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 SYNCRIPO60506 623 aaKnown RBP17.65■□□□□ 0.42
TUBB3-211ENST00000556536 NEBLO76041 1014 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 IFNB1P01574 187 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 ZSCAN5DPP0CG00 497 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 CR2P20023 1033 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 STIP1P31948 543 aaKnown RBP17.65■□□□□ 0.42
TUBB3-211ENST00000556536 CHRNA3P32297 505 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 NBL1P41271 181 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 FNTAP49354 379 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 CCNHP51946 323 aaPredicted RBP17.65■□□□□ 0.42
TUBB3-211ENST00000556536 DSC2Q02487 901 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 ITKQ08881 620 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 NSUN2Q08J23 767 aaKnown RBP eCLIP17.65■□□□□ 0.42
TUBB3-211ENST00000556536 NIPAL4Q0D2K0 466 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 MTAPQ13126 283 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 CAMK2GQ13555 558 aaPredicted RBP17.65■□□□□ 0.42
TUBB3-211ENST00000556536 IHHQ14623 411 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 MYLK3Q32MK0 819 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 ANKRD20A2Q5SQ80 823 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 ANKRD20A1Q5TYW2 823 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 ANKRD20A3Q5VUR7 823 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 ASCL5Q7RTU5 278 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 PID1Q7Z2X4 250 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 SRLQ86TD4 932 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 PLPP6Q8IY26 295 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 STK40Q8N2I9 435 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 RYBPQ8N488 228 aaPredicted RBP17.65■□□□□ 0.42
TUBB3-211ENST00000556536 ATL2Q8NHH9 583 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 GDAP1L1Q96MZ0 367 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 SPATA13Q96N96 652 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 FAM129BQ96TA1 746 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 VAT1Q99536 393 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 FERMT1Q9BQL6 677 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 HECAQ9UBI9 543 aaPredicted RBP17.65■□□□□ 0.42
TUBB3-211ENST00000556536 AMACRQ9UHK6 382 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 EVLQ9UI08 416 aaPredicted RBP17.65■□□□□ 0.42
TUBB3-211ENST00000556536 TRHDEQ9UKU6 1024 aa17.65■□□□□ 0.42
TUBB3-211ENST00000556536 PRR23AA6NEV1 266 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 F5H423 210 aaPredicted RBP17.64■□□□□ 0.41
TUBB3-211ENST00000556536 CCDC188H7C350 402 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 ATG13O75143 517 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 GCATO75600 419 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 ZNF189O75820 626 aaPredicted RBP17.64■□□□□ 0.41
TUBB3-211ENST00000556536 STK10O94804 968 aaKnown RBP17.64■□□□□ 0.41
TUBB3-211ENST00000556536 IGSF6O95976 241 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 NFKB1P19838 968 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 HSPA9P38646 679 aaKnown RBP17.64■□□□□ 0.41
TUBB3-211ENST00000556536 SCNN1BP51168 640 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 CLCN5P51795 746 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 SNRPD1P62314 119 aaKnown RBP17.64■□□□□ 0.41
TUBB3-211ENST00000556536 CRY1Q16526 586 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 ALG1LQ6GMV1 187 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 SYT13Q7L8C5 426 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 GSTA5Q7RTV2 222 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 ERMP1Q7Z2K6 904 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 SPEM1Q8N4L4 309 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 ARRDC2Q8TBH0 407 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 NUDCD1Q96RS6 583 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 KRT12Q99456 494 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 SEMA3CQ99985 751 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 POLR1EQ9GZS1 481 aaKnown RBP17.64■□□□□ 0.41
TUBB3-211ENST00000556536 NOD2Q9HC29 1040 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 GLOD4Q9HC38 313 aa17.64■□□□□ 0.41
TUBB3-211ENST00000556536 DCHS1Q96JQ0 3298 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms