RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 GJC1P36383 396 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 PSMD8P48556 350 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 CCZ1BP86790 482 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 CCZ1P86791 482 aaPredicted RBP9.81□□□□□ -0.84
SRP54-210ENST00000556380 RPL6Q02878 288 aaKnown RBP9.81□□□□□ -0.84
SRP54-210ENST00000556380 IL10RBQ08334 325 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 SLC10A2Q12908 348 aaPredicted RBP9.81□□□□□ -0.84
SRP54-210ENST00000556380 ELF2Q15723 593 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 MYLK3Q32MK0 819 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 NCBP2-AS2Q69YL0 99 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 TMCO3Q6UWJ1 677 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 DSG4Q86SJ6 1040 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 MAP7D3Q8IWC1 876 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 LRRC8AQ8IWT6 810 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 RHOT1Q8IXI2 618 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 HDDC3Q8N4P3 179 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 DEFB119Q8N690 84 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 CADM4Q8NFZ8 388 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 C1orf216Q8TAB5 229 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 PIP4K2CQ8TBX8 421 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 GPR174Q9BXC1 333 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 CALN1Q9BXU9 219 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 NEUROG2Q9H2A3 272 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 SGK2Q9HBY8 427 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 HECAQ9UBI9 543 aaPredicted RBP9.81□□□□□ -0.84
SRP54-210ENST00000556380 LHX3Q9UBR4 397 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 TRIM10Q9UDY6 481 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 PCDHGA5Q9Y5G8 931 aa9.81□□□□□ -0.84
SRP54-210ENST00000556380 A0A1W2PP55 124 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 GRID2IPA4D2P6 1211 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 METTL12A8MUP2 240 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 DFFAO00273 331 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 PLK4O00444 970 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 ARHGAP6O43182 974 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 PSTPIP1O43586 416 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 SPOPO43791 374 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 MAFKO60675 156 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 LRP3O75074 770 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 LEFTY1O75610 366 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 RNASEH2AO75792 299 aaKnown RBP9.8□□□□□ -0.84
SRP54-210ENST00000556380 POP4O95707 220 aaKnown RBP9.8□□□□□ -0.84
SRP54-210ENST00000556380 ITPKAP23677 461 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 GKP32189 559 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 CDKN2BP42772 138 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 MARCKSL1P49006 195 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 PEX5P50542 639 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 CCNHP51946 323 aaPredicted RBP9.8□□□□□ -0.84
SRP54-210ENST00000556380 SNRPD1P62314 119 aaKnown RBP9.8□□□□□ -0.84
SRP54-210ENST00000556380 GBE1Q04446 702 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 ZNF33AQ06730 810 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 GALNT2Q10471 571 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 CNTN1Q12860 1018 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 SFSWAPQ12872 951 aaKnown RBP9.8□□□□□ -0.84
SRP54-210ENST00000556380 TTC31Q49AM3 519 aaPredicted RBP9.8□□□□□ -0.84
SRP54-210ENST00000556380 FAM46CQ5VWP2 391 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 PEAR1Q5VY43 1037 aaPredicted RBP9.8□□□□□ -0.84
SRP54-210ENST00000556380 SLC9A4Q6AI14 798 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 MFSD7Q6UXD7 560 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 KIAA1328Q86T90 577 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 FAM124AQ86V42 546 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 LRRC49Q8IUZ0 686 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 KATNAL2Q8IYT4 538 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 CCDC112Q8NEF3 446 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 OR2AP1Q8NGE2 309 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 DNASE2BQ8WZ79 361 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 KRT35Q92764 455 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 ARRDC3Q96B67 414 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 NSMCE3Q96MG7 304 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 ZNF599Q96NL3 588 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 TSGA13Q96PP4 275 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 HEPHQ9BQS7 1158 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 ORAI3Q9BRQ5 295 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 HDAC8Q9BY41 377 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 TM6SF2Q9BZW4 377 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 BTBD1Q9H0C5 482 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 PCED1AQ9H1Q7 454 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 ARRDC1-AS1Q9H2J1 176 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 C6orf106Q9H6K1 298 aaPredicted RBP9.8□□□□□ -0.84
SRP54-210ENST00000556380 TMEM74BQ9NUR3 256 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 DDX56Q9NY93 547 aaKnown RBP9.8□□□□□ -0.84
SRP54-210ENST00000556380 GMPR2Q9P2T1 348 aaKnown RBP9.8□□□□□ -0.84
SRP54-210ENST00000556380 UBA2Q9UBT2 640 aaPredicted RBP9.8□□□□□ -0.84
SRP54-210ENST00000556380 IL36AQ9UHA7 158 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 PILRBQ9UKJ0 227 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 FZD4Q9ULV1 537 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 NCKAP1Q9Y2A7 1128 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 PCDHA3Q9Y5H8 950 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 CACNA1EQ15878 2313 aa9.8□□□□□ -0.84
SRP54-210ENST00000556380 LRRD1A4D1F6 860 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 C1QTNF3-AMACRE9PGA6 284 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 MUSKO15146 869 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 INSIG1O15503 277 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 SLC7A4O43246 635 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 MFSD11O43934 449 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 BNIP3LO60238 219 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 SEMA4FO95754 770 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 PRNPP04156 253 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 KRT1P04264 644 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 IGHV4-34P06331 123 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 ZNF806P0C7X5 589 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms