RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 HAO1Q9UJM8 370 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 FBXO4Q9UKT5 387 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 MAFFQ9ULX9 164 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 ST3GAL5Q9UNP4 418 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 ICKQ9UPZ9 632 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 TNFSF13BQ9Y275 285 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 REXO2Q9Y3B8 237 aaKnown RBP3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 PCDHGB5Q9Y5G0 923 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 SESN1Q9Y6P5 492 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 RAD54L2Q9Y4B4 1467 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 A0A0G2JLL6 359 aaPredicted RBP3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 TCRBV5S1A1TA0A578 114 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 CDRT15L2A8MXV6 281 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 USP17L23D6RBM5 183 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 UBE2CO00762 179 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 SCAMP1O15126 338 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 ADAM20O43506 726 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 USP12O75317 370 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 ENTPD3O75355 529 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 DDAH2O95865 285 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 IL1AP01583 271 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 RB1P06400 928 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 HOXB5P09067 269 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 PRR35P0CG20 571 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 SLC2A4P14672 509 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 CHRNA5P30532 468 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 ADRA1BP35368 520 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 MPLP40238 635 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 SOX2P48431 317 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 CD151P48509 253 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 LMAN1P49257 510 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 CYP2J2P51589 502 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 MRPL12P52815 198 aaKnown RBP3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 ARSFP54793 590 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 ZBED6P86452 979 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 PLP2Q04941 152 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 PRPF4BQ13523 1007 aaKnown RBP3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 VEPH1Q14D04 833 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 RNPS1Q15287 305 aaKnown RBP3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 NTRK2Q16620 822 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 HIST2H2ACQ16777 129 aaPredicted RBP3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 BMP2KLQ5H9B9 411 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 GKAP1Q5VSY0 366 aaPredicted RBP3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 GARNL3Q5VVW2 1013 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 KLHL10Q6JEL2 608 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 TSSK4Q6SA08 328 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 SERPINA13PQ6UXR4 307 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 Q6YL49 198 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 TFAP2DQ7Z6R9 452 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 ADGRA1Q86SQ6 560 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 ZSCAN30Q86W11 494 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 VSIG1Q86XK7 387 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 ANKRD13BQ86YJ7 626 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 TMEM217Q8N7C4 229 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 POC5Q8NA72 575 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 KCTD6Q8NC69 237 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 GDPD5Q8WTR4 605 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 TMEM170AQ8WVE7 144 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 IP6K1Q92551 441 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 SLC9A6Q92581 669 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 CAVIN3Q969G5 261 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 ITFG2Q969R8 447 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 MMABQ96EY8 250 aaPredicted RBP3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 PDLIM2Q96JY6 352 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 MYCBPQ99417 103 aaPredicted RBP3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 NCAPGQ9BPX3 1015 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 FRMD8Q9BZ67 464 aaPredicted RBP3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 OR10A4Q9H209 315 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 IKZF4Q9H2S9 585 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 RABEP2Q9H5N1 569 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 RETREG1Q9H6L5 497 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 CYP4F11Q9HBI6 524 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 CCDC177Q9NQR7 707 aaPredicted RBP3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 ASAH2Q9NR71 780 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 GIMAP4Q9NUV9 329 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 DLGAP2Q9P1A6 1054 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 MARCH4Q9P2E8 410 aaPredicted RBP3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 TSC22D4Q9Y3Q8 395 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 FAM169AQ9Y6X4 670 aa3.16□□□□□ -1.9
MTHFD1-212ENST00000555858 TARSL2A2RTX5 802 aaKnown RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 CBY3A6NI87 242 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 GLOD5A6NK44 160 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 A8MV72 311 aaPredicted RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 BTBD18B2RXH4 712 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 UBE2Q2LH0YL09 131 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 SNAP23O00161 211 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 RRHO14718 337 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 TP73O15350 636 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 MSI1O43347 362 aaKnown RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 JTBO76095 146 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 TFP02787 698 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 PTPN2P17706 415 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 GABRB1P18505 474 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 TNFRSF1AP19438 455 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 HOXA5P20719 270 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 TBXAS1P24557 533 aaPredicted RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 CDAP32320 146 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 PTGER1P34995 402 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 SLC15A1P46059 708 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms