RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 PALM2Q8IXS6 379 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 CPA6Q8N4T0 437 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 DNAAF3Q8N9W5 541 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 SMRP1Q8NCR6 262 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 FBXO36Q8NEA4 188 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 OR52K1Q8NGK4 314 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 PPM1EQ8WY54 764 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 ACDQ96AP0 544 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 IMP4Q96G21 291 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 LMLNQ96KR4 655 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 TTC25Q96NG3 672 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 SEMA3CQ99985 751 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 TBL1YQ9BQ87 522 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 APOL2Q9BQE5 337 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 FSD1LQ9BXM9 530 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 PHACTR1Q9C0D0 580 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 PABPC3Q9H361 631 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 VIPAS39Q9H9C1 493 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 VPS37BQ9H9H4 285 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 INTS6Q9UL03 887 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 CHMP2BQ9UQN3 213 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 MAD1L1Q9Y6D9 718 aa9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 KIF26AQ9ULI4 1882 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-220ENST00000555585 AP3B1O00203 1094 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 MUSKO15146 869 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 HOXC11O43248 304 aaPredicted RBP9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 ECI2O75521 394 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 TTC4O95801 387 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 AGTP01019 485 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 SERPINF2P08697 491 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 MLNP12872 115 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 PSMC3P17980 439 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 POLR2EP19388 210 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 KCNA5P22460 613 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 MGAT1P26572 445 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 GDI1P31150 447 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 CTSOP43234 321 aaPredicted RBP9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 SCNN1BP51168 640 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 WNT3AP56704 352 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 SKOR1P84550 965 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 SLC20A2Q08357 652 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 IFFO1Q0D2I5 559 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 FCHO2Q0JRZ9 810 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 RUNX3Q13761 415 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 SLC29A2Q14542 456 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 FUT11Q495W5 492 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 CCDC38Q502W7 563 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 MBLAC2Q68D91 279 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 CASC4Q6P4E1 433 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 KDELC1Q6UW63 502 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 MTSS1LQ765P7 747 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 ZNF534Q76KX8 674 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 Q7L0L9 218 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 PRPF39Q86UA1 669 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 RELL1Q8IUW5 271 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 KLHDC8BQ8IXV7 354 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 AHI1Q8N157 1196 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 ATP11CQ8NB49 1132 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 TTC8Q8TAM2 541 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 ARRDC2Q8TBH0 407 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 WFIKKN2Q8TEU8 576 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 FGF14Q92915 247 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 IFT43Q96FT9 208 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 CFAP36Q96G28 342 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 EXOC2Q96KP1 924 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 RPL10LQ96L21 214 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 MRGPRX2Q96LB1 330 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 ZIM3Q96PE6 472 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 PSKH2Q96QS6 385 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 FAM83CQ9BQN1 747 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 ECT2Q9H8V3 914 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 CASS4Q9NQ75 786 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 HPS4Q9NQG7 708 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 RYDENQ9NUL5 291 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 PIH1D1Q9NWS0 290 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 LHX6Q9UPM6 363 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 FCF1Q9Y324 198 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 DOCK8Q8NF50 2099 aa9.79□□□□□ -0.84
HNRNPC-220ENST00000555585 GRXCR2A6NFK2 248 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 SDR42E2A6NKP2 422 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 K7ERQ8 282 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 TRIM24O15164 1050 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 INSIG1O15503 277 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 GJB3O75712 270 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 CD160O95971 181 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 MT-CO1P00395 513 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 MMP2P08253 660 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 CISD3P0C7P0 127 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 SRCP12931 536 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 FOSL2P15408 326 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 TPH1P17752 444 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 CES1P23141 567 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 PHBP35232 272 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 ADRA1AP35348 466 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 RGRP47804 291 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 SLC6A11P48066 632 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 NPY2RP49146 381 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 STK19P49842 368 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 SERPINH1P50454 418 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms