RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 POLNQ7Z5Q5 900 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 SETD3Q86TU7 594 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-213ENST00000555386 PSTKQ8IV42 348 aaKnown RBP10.05□□□□□ -0.8
PSEN1-213ENST00000555386 CCDC50Q8IVM0 306 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.05□□□□□ -0.8
PSEN1-213ENST00000555386 OR2W6PQ8NHA6 318 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 ATL2Q8NHH9 583 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 HMGB4Q8WW32 186 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 ACDQ96AP0 544 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 CENPTQ96BT3 561 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 HMCESQ96FZ2 354 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 CSPG4P5Q96PW8 444 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 ROPN1BQ9BZX4 212 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-213ENST00000555386 SLC6A17Q9H1V8 727 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 EPB41L4BQ9H329 900 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 ROPN1Q9HAT0 212 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-213ENST00000555386 BCCIPQ9P287 314 aaKnown RBP eCLIP10.05□□□□□ -0.8
PSEN1-213ENST00000555386 RAPGEFL1Q9UHV5 662 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 VPS51Q9UID3 782 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 SLCO3A1Q9UIG8 710 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 SLC25A13Q9UJS0 675 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 MMP17Q9ULZ9 603 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 ERVW-1Q9UQF0 538 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 CKAP5Q14008 2032 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 DMDP11532 3685 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 NUMA1Q14980 2115 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 ABCA7Q8IZY2 2146 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 TCRBV7S2A1N4TA0A589 114 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 TCRBV21S2A2A0A5A6 115 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 ILVBLA1L0T0 632 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 TTC34A8MYJ7 566 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 RASA4BC9J798 803 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 H0Y858 1186 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 K7ERQ8 282 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 NDC80O14777 642 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 FGF10O15520 208 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 RASA4O43374 803 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 TIMM44O43615 452 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 SYNCRIPO60506 623 aaKnown RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 FAM107AO95990 144 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 MT-CO1P00395 513 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 AGTP01019 485 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 COL9A1P20849 921 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 KDELR1P24390 212 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 PTPN7P35236 360 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 MAGEA9P43362 315 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 CCT5P48643 541 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 COPS2P61201 443 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 DYNLT1P63172 113 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 GUCY1A3Q02108 690 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 LMNB2Q03252 620 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 DMWDQ09019 674 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 KLF1Q13351 362 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 SLC12A1Q13621 1099 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 DPYSQ14117 519 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 EIF4HQ15056 248 aaKnown RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 PTPRNQ16849 979 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 KIAA1211LQ6NV74 962 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 TRMT11Q7Z4G4 463 aaKnown RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 KIAA0907Q7Z7F0 614 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 RFX6Q8HWS3 928 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 MAP7D3Q8IWC1 876 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 TP53INP2Q8IXH6 220 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 NPWQ8N729 165 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 ATP11CQ8NB49 1132 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 TSTD1Q8NFU3 115 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 CCHCR1Q8TD31 782 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 ARHGEF2Q92974 986 aaKnown RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 TTC17Q96AE7 1141 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 ALG14Q96F25 216 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 SNF8Q96H20 258 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 RBM41Q96IZ5 413 aaKnown RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 C2orf49Q9BVC5 232 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 MAK16Q9BXY0 300 aaKnown RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 TPSD1Q9BZJ3 242 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 FOXP3Q9BZS1 431 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 KLC2Q9H0B6 622 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 CENPHQ9H3R5 247 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 THAP10Q9P2Z0 257 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 ZNF212Q9UDV6 495 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 NOVA2Q9UNW9 492 aaKnown RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 INVSQ9Y283 1065 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 STARD13Q9Y3M8 1113 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 OR51B4Q9Y5P0 310 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 EML5Q05BV3 1969 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 GALR2O43603 387 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 ASLP04424 464 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 VAV1P15498 845 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 HPDP32754 393 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 NNMTP40261 264 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 PAPOLAP51003 745 aaKnown RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 DGKEP52429 567 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 STARD3Q14849 445 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 PDK2Q15119 407 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 CRY1Q16526 586 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 ANKRD20A8PQ5CZ79 823 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 DRICH1Q6PGQ1 229 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 KIAA1324Q6UXG2 1013 aaKnown RBP10.04□□□□□ -0.8
PSEN1-213ENST00000555386 SYT13Q7L8C5 426 aa10.04□□□□□ -0.8
PSEN1-213ENST00000555386 YTHDF3Q7Z739 585 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms