RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 COX16Q9P0S2 106 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 SPASTQ9UBP0 616 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 KLF15Q9UIH9 416 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 PCDHGC3Q9UN70 934 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 DOCK9Q9BZ29 2069 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 AGRPO00253 132 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 FPGTO14772 594 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 TPP1O14773 563 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 RAD51BO15315 384 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 HSF2BPO75031 334 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 TPM2P07951 284 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 ANXA6P08133 673 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 JMJD7P0C870 316 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 SRCP12931 536 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 HGFP14210 728 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 CCR1P32246 355 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 RECQLP46063 649 aaPredicted RBP13.5□□□□□ -0.25
TUBB3-207ENST00000554927 ADKP55263 362 aaKnown RBP13.5□□□□□ -0.25
TUBB3-207ENST00000554927 RPS21P63220 83 aaKnown RBP13.5□□□□□ -0.25
TUBB3-207ENST00000554927 SGCGQ13326 291 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 C1orf61Q13536 156 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 TMEM259Q4ZIN3 620 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 VWA3BQ502W6 1294 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 ARSIQ5FYB1 569 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 ESRP1Q6NXG1 681 aaKnown RBP13.5□□□□□ -0.25
TUBB3-207ENST00000554927 FBXL22Q6P050 247 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 C11orf57Q6ZUT1 292 aaPredicted RBP13.5□□□□□ -0.25
TUBB3-207ENST00000554927 VASH2Q86V25 355 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 IRF2BP1Q8IU81 584 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 SLC35F3Q8IY50 421 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 RBFAQ8N0V3 343 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 TMIEQ8NEW7 156 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 OR52K2Q8NGK3 314 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 OR2A12Q8NGT7 310 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 BTN2A2Q8WVV5 523 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 ALG14Q96F25 216 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 FEM1CQ96JP0 617 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 SEMA3CQ99985 751 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 BOCQ9BWV1 1114 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 HDAC8Q9BY41 377 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 SLC25A18Q9H1K4 315 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 ACP6Q9NPH0 428 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 ASNSD1Q9NWL6 643 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 DDIT4Q9NX09 232 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 GULP1Q9UBP9 304 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 PISDQ9UG56 409 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 APOBEC3BQ9UH17 382 aaKnown RBP13.5□□□□□ -0.25
TUBB3-207ENST00000554927 PADI4Q9UM07 663 aa13.5□□□□□ -0.25
TUBB3-207ENST00000554927 BECN2A8MW95 431 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 TMX2-CTNND1H3BSU7 103 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 K7ERQ8 282 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 NOBOXO60393 691 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 MT-CO1P00395 513 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 LIPCP11150 499 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 RRM1P23921 792 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 NEK3P51956 506 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 CYP4F2P78329 520 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 KRT83P78385 493 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 EIF3IQ13347 325 aaKnown RBP13.49□□□□□ -0.25
TUBB3-207ENST00000554927 RAPGEF1Q13905 1077 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 FGL2Q14314 439 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 PRRT3Q5FWE3 981 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 KIAA1161Q6NSJ0 714 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 B3GNT8Q7Z7M8 397 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 PTRH1Q86Y79 214 aaKnown RBP13.49□□□□□ -0.25
TUBB3-207ENST00000554927 ZDHHC17Q8IUH5 632 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 PASD1Q8IV76 773 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 DEFB106AQ8N104 65 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 CHST14Q8NCH0 376 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 GFM1Q96RP9 751 aaKnown RBP13.49□□□□□ -0.25
TUBB3-207ENST00000554927 PRMT1Q99873 361 aaKnown RBP13.49□□□□□ -0.25
TUBB3-207ENST00000554927 FOXP3Q9BZS1 431 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 GPR27Q9NS67 375 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 TMEM51Q9NW97 253 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 IL36AQ9UHA7 158 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 VANGL2Q9ULK5 521 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 DOLKQ9UPQ8 538 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 PCDHB11Q9Y5F2 797 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 PCDHGA4Q9Y5G9 962 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 UNC79Q9P2D8 2635 aa13.49□□□□□ -0.25
TUBB3-207ENST00000554927 USP9XQ93008 2570 aaPredicted RBP13.48□□□□□ -0.25
TUBB3-207ENST00000554927 FOXN3O00409 490 aaPredicted RBP13.48□□□□□ -0.25
TUBB3-207ENST00000554927 SNAP91O60641 907 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 GCATO75600 419 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 ENDOD1O94919 500 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 NOS2P35228 1153 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 THOP1P52888 689 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 PITX1P78337 314 aaPredicted RBP13.48□□□□□ -0.25
TUBB3-207ENST00000554927 APBA1Q02410 837 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 EIF2B5Q13144 721 aaKnown RBP13.48□□□□□ -0.25
TUBB3-207ENST00000554927 DPCR1Q3MIW9 517 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 TPRG1LQ5T0D9 272 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 PHACTR4Q8IZ21 702 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 TMEM35BQ8NCS4 154 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 MSANTD4Q8NCY6 345 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 C1orf131Q8NDD1 294 aaKnown RBP13.48□□□□□ -0.25
TUBB3-207ENST00000554927 CPXM1Q96SM3 734 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 SLC13A1Q9BZW2 595 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 TNKS2Q9H2K2 1166 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 TCEAL2Q9H3H9 227 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms