RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 TNFSF14O43557 240 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 STRNO43815 780 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 CCNT1O60563 726 aaKnown RBP3.33□□□□□ -1.88
SCFD1-213ENST00000554776 ZBED4O75132 1171 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 TACC1O75410 805 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 TIPRLO75663 272 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 EPN2O95208 641 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 EDN2P20800 178 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 OAZ1P54368 228 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 FOXG1P55316 489 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-213ENST00000554776 LINC00205P59089 165 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 RPS3AP61247 264 aaKnown RBP3.33□□□□□ -1.88
SCFD1-213ENST00000554776 EFNB1P98172 346 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 NEXNQ0ZGT2 675 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 PTP4A2Q12974 167 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 INPP5JQ15735 1006 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-213ENST00000554776 PLK5Q496M5 336 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 TTC39AQ5SRH9 613 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 C6orf10Q5SRN2 563 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 SNX30Q5VWJ9 437 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 GJB7Q6PEY0 223 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 NEK10Q6ZWH5 1172 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 KDELC2Q7Z4H8 507 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 PIM3Q86V86 326 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 DNAAF1Q8NEP3 725 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 NFKBIDQ8NI38 313 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 ZCCHC10Q8TBK6 192 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 HSPH1Q92598 858 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 SH3KBP1Q96B97 665 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 PERPQ96FX8 193 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 KLHL15Q96M94 604 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 CADM1Q9BY67 442 aaKnown RBP3.33□□□□□ -1.88
SCFD1-213ENST00000554776 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.33□□□□□ -1.88
SCFD1-213ENST00000554776 CXorf56Q9H5V9 222 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 BRF2Q9HAW0 419 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 TRBV5-7A0A0A0MS05 114 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 IGLV5-39A0A0G2JS06 123 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 PABPN1LA6NDY0 278 aaKnown RBP3.32□□□□□ -1.88
SCFD1-213ENST00000554776 FAM90A10PA6NDY2 464 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 NPIPB15A6NHN6 443 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-213ENST00000554776 LDLRAD4O15165 306 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 HBP1O60381 514 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 DDX58O95786 925 aaKnown RBP3.32□□□□□ -1.88
SCFD1-213ENST00000554776 ADAP00813 363 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 CHRM4P08173 479 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 SPARCP09486 303 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 HSPA1AP0DMV8 641 aaKnown RBP3.32□□□□□ -1.88
SCFD1-213ENST00000554776 HSPA1BP0DMV9 641 aaKnown RBP3.32□□□□□ -1.88
SCFD1-213ENST00000554776 CHRNB1P11230 501 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 KLRC2P26717 231 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 CIITAP33076 1130 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 GJC1P36383 396 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 GPD2P43304 727 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 ALDH7A1P49419 539 aaKnown RBP3.32□□□□□ -1.88
SCFD1-213ENST00000554776 CTCFP49711 727 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-213ENST00000554776 CYP2J2P51589 502 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 POLGP54098 1239 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-213ENST00000554776 DRG2P55039 364 aaKnown RBP3.32□□□□□ -1.88
SCFD1-213ENST00000554776 PMPCAQ10713 525 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 PKP1Q13835 747 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 ENTPD8Q5MY95 495 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 FAM171A1Q5VUB5 890 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 C16orf54Q6UWD8 224 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 C17orf99Q6UX52 265 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 COLCA1Q6ZS62 124 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 PXKQ7Z7A4 578 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 NGEFQ8N5V2 710 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 TNIP2Q8NFZ5 429 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 ADAMTS15Q8TE58 950 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 FRG2BQ96QU4 278 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 PIP5K1AQ99755 562 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 WACQ9BTA9 647 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 ITPAQ9BY32 194 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 FTOQ9C0B1 505 aaKnown RBP eCLIP3.32□□□□□ -1.88
SCFD1-213ENST00000554776 ACTR5Q9H9F9 607 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-213ENST00000554776 DECR2Q9NUI1 292 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 SEPT11Q9NVA2 429 aaKnown RBP3.32□□□□□ -1.88
SCFD1-213ENST00000554776 TAS2R10Q9NYW0 307 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 KCND2Q9NZV8 630 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 HSPB7Q9UBY9 170 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 COG5Q9UP83 839 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 ICKQ9UPZ9 632 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 DHDHQ9UQ10 334 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 OSGIN2Q9Y236 505 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 SLC45A1Q9Y2W3 748 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 RUSC2Q8N2Y8 1516 aa3.32□□□□□ -1.88
SCFD1-213ENST00000554776 KDM3AQ9Y4C1 1321 aa3.31□□□□□ -1.88
SCFD1-213ENST00000554776 TMEM272A0A1B0GTI8 110 aa3.31□□□□□ -1.88
SCFD1-213ENST00000554776 ANKRD18BA2A2Z9 1011 aa3.31□□□□□ -1.88
SCFD1-213ENST00000554776 OR6C68A6NDL8 312 aa3.31□□□□□ -1.88
SCFD1-213ENST00000554776 CD8B2A6NJW9 211 aa3.31□□□□□ -1.88
SCFD1-213ENST00000554776 B4DGG1 531 aa3.31□□□□□ -1.88
SCFD1-213ENST00000554776 H3BNX3 289 aa3.31□□□□□ -1.88
SCFD1-213ENST00000554776 AP3D1O14617 1153 aa3.31□□□□□ -1.88
SCFD1-213ENST00000554776 SLC25A17O43808 307 aa3.31□□□□□ -1.88
SCFD1-213ENST00000554776 PTP4A3O75365 173 aa3.31□□□□□ -1.88
SCFD1-213ENST00000554776 TMEM63AO94886 807 aa3.31□□□□□ -1.88
SCFD1-213ENST00000554776 SEC31AO94979 1220 aaKnown RBP3.31□□□□□ -1.88
SCFD1-213ENST00000554776 NDUFB8O95169 186 aa3.31□□□□□ -1.88
SCFD1-213ENST00000554776 OAZ2O95190 189 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms