RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 KRT38O76015 456 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 EZRP15311 586 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 SLC7A1P30825 629 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PLK1P53350 603 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ARFIP2P53365 341 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 LILRA4P59901 499 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PURAQ00577 322 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 RHDQ02161 417 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PDE4CQ08493 712 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 SMARCB1Q12824 385 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 BOP1Q14137 746 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PCBP2Q15366 365 aaKnown RBP eCLIP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TRIP4Q15650 581 aaPredicted RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 GRIK4Q16099 956 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 LY6KQ17RY6 165 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 KIZQ2M2Z5 673 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CNPY1Q3B7I2 92 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 FAM182BQ5T319 152 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 EFCAB12Q6NXP0 572 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 Q6ZNB5 142 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 Q6ZNX1 250 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF365Q70YC5 407 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PIWIL3Q7Z3Z3 882 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 SCD5Q86SK9 330 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 LINC00523Q86TU6 105 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 EPHX4Q8IUS5 362 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 WDR75Q8IWA0 830 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 SRRM1Q8IYB3 904 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 C1orf52Q8N6N3 182 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 SHKBP1Q8TBC3 707 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PNPT1Q8TCS8 783 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 HCAR2Q8TDS4 363 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ALG14Q96F25 216 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CDCA5Q96FF9 252 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 DHRS1Q96LJ7 313 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PITX2Q99697 317 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CD320Q9NPF0 282 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 SNX15Q9NRS6 342 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 RGS18Q9NS28 235 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PIGVQ9NUD9 493 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 SAGE1Q9NXZ1 904 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PPM1HQ9ULR3 514 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 AP4E1Q9UPM8 1137 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TLR6Q9Y2C9 796 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PCDHGB3Q9Y5G1 929 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 GPR45Q9Y5Y3 372 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CLRN2A0PK11 232 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CHMP2AO43633 222 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 SEC14L2O76054 403 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 SLC34A2O95436 690 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CD160O95971 181 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CXCL10P02778 98 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TROVE2P10155 538 aaKnown RBP eCLIP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 COX4I1P13073 169 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 IMPDH1P20839 514 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 BGNP21810 368 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CES1P23141 567 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 HTR1EP28566 365 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 HPDP32754 393 aaPredicted RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PPARGP37231 505 aaPredicted RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TM4SF4P48230 202 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 LHX1P48742 406 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 RBM5P52756 815 aaKnown RBP eCLIP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PHEXP78562 749 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ARID5AQ03989 594 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 GBE1Q04446 702 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 RCAN2Q14206 197 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 SQLEQ14534 574 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 SNX17Q15036 470 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TMED2Q15363 201 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 SLC4A8Q2Y0W8 1093 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ANO4Q32M45 955 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 LIN52Q52LA3 116 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PCID2Q5JVF3 399 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TCERG1LQ5VWI1 586 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 MSL1Q68DK7 614 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 FSTL4Q6MZW2 842 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 C16orf46Q6P387 395 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ELMSAN1Q6PJG2 1045 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 RAPH1Q70E73 1250 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CHST9Q7L1S5 443 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ALYREFQ86V81 257 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 RHPN2Q8IUC4 686 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 MAP7D3Q8IWC1 876 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PLD6Q8N2A8 252 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 B3GALNT2Q8NCR0 500 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 MICAL1Q8TDZ2 1067 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 RNF139Q8WU17 664 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM40Q8WWA1 233 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 FAM84AQ96KN4 292 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 KLHL32Q96NJ5 620 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PHF12Q96QT6 1004 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 UNC93B1Q9H1C4 597 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TFB2MQ9H5Q4 396 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PCMTD2Q9NV79 361 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 SYBUQ9NX95 663 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM216Q9P0N5 145 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 MAP10Q9P2G4 905 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ASIC3Q9UHC3 531 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CDY2AQ9Y6F7 541 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms