RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 XPAP23025 273 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-228ENST00000554592 U2AF2P26368 475 aaKnown RBP eCLIP5.2□□□□□ -1.58
ATXN3-228ENST00000554592 LRPAP1P30533 357 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 GNALP38405 381 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 P2RY2P41231 377 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 PTGER3P43115 390 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 RRADP55042 308 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 MRPS21P82921 87 aaKnown RBP5.2□□□□□ -1.58
ATXN3-228ENST00000554592 CD69Q07108 199 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 MGAT5Q09328 741 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 SMARCB1Q12824 385 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 ZNF267Q14586 743 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-228ENST00000554592 ZBTB6Q15916 424 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 MGAT5BQ3V5L5 792 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 MINDY4Q4G0A6 757 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 EARS2Q5JPH6 523 aaKnown RBP5.2□□□□□ -1.58
ATXN3-228ENST00000554592 LYSMD4Q5XG99 296 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 RABEPKQ7Z6M1 372 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 GLB1L3Q8NCI6 653 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-228ENST00000554592 ERMNQ8TAM6 284 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 C2orf15Q8WU43 125 aaKnown RBP5.2□□□□□ -1.58
ATXN3-228ENST00000554592 OSCP1Q8WVF1 389 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 NRG4Q8WWG1 115 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 MRPS31Q92665 395 aaKnown RBP5.2□□□□□ -1.58
ATXN3-228ENST00000554592 WDR92Q96MX6 357 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 MTMR9Q96QG7 549 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 FNBP1Q96RU3 617 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 TSPAN18Q96SJ8 248 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 SEPT5Q99719 369 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-228ENST00000554592 GTPBP2Q9BX10 602 aaKnown RBP5.2□□□□□ -1.58
ATXN3-228ENST00000554592 GTPBP4Q9BZE4 634 aaKnown RBP5.2□□□□□ -1.58
ATXN3-228ENST00000554592 KLC2Q9H0B6 622 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 POLD4Q9HCU8 107 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 DUS2Q9NX74 493 aaKnown RBP5.2□□□□□ -1.58
ATXN3-228ENST00000554592 DKK4Q9UBT3 224 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 LIMCH1Q9UPQ0 1083 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 CCL26Q9Y258 94 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 SNX14Q9Y5W7 946 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 SPEGQ15772 3267 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 IGF2RP11717 2491 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 FRYQ5TBA9 3013 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 MYMKA6NI61 221 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 CCDC169A6NNP5 214 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 AP1G1O43747 822 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 SH3BP5O60239 455 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 NEMFO60524 1076 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 TMEM127O75204 238 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 TOM1L1O75674 476 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 LY86O95711 162 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 CFIP05156 583 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 CLTAP09496 248 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 FTH1P19P0C7X4 201 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 HAPLN1P10915 354 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-228ENST00000554592 ATF6P18850 670 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 PDCP20941 246 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 MUTP22033 750 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 RPA1P27694 616 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 KRT2P35908 639 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 NPTX2P47972 431 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 IFNAR2P48551 515 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 PEX3P56589 373 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 NRG3P56975 720 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 LILRA4P59901 499 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 HGFACQ04756 655 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 PPP3CAQ08209 521 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 DMP1Q13316 513 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-228ENST00000554592 TOB2Q14106 344 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-228ENST00000554592 MTF1Q14872 753 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 PCOLCEQ15113 449 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 BMP2KLQ5H9B9 411 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 ZMAT1Q5H9K5 638 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 EOGTQ5NDL2 527 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 AGBL4Q5VU57 503 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 NAIF1Q69YI7 327 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-228ENST00000554592 TXNDC8Q6A555 127 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 SLC36A4Q6YBV0 504 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 RUFY3Q7L099 469 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 TMEM150AQ86TG1 271 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 TAX1BP1Q86VP1 789 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 TTC30AQ86WT1 665 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 GLB1L2Q8IW92 636 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 THEM5Q8N1Q8 247 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 MINDY1Q8N5J2 469 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 CCDC33Q8N5R6 958 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 PNPLA1Q8N8W4 532 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 LSM14AQ8ND56 463 aaKnown RBP5.19□□□□□ -1.58
ATXN3-228ENST00000554592 MDGA1Q8NFP4 955 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 MDM1Q8TC05 714 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 SPPL2BQ8TCT7 592 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 RLN3Q8WXF3 142 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 WASF1Q92558 559 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 ATP2A3Q93084 1043 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 LRRC37BQ96QE4 947 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 NTPCRQ9BSD7 190 aaKnown RBP5.19□□□□□ -1.58
ATXN3-228ENST00000554592 ZCWPW1Q9H0M4 648 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 TUBGCP4Q9UGJ1 667 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 MMP17Q9ULZ9 603 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 UBQLN1Q9UMX0 589 aaKnown RBP5.19□□□□□ -1.58
ATXN3-228ENST00000554592 OAZ3Q9UMX2 235 aa5.19□□□□□ -1.58
ATXN3-228ENST00000554592 DNM3Q9UQ16 869 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms