RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 STOX1Q6ZVD7 989 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 HIST3H2AQ7L7L0 130 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 FSTL5Q8N475 847 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 FAM71DQ8N9W8 422 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 FAM13CQ8NE31 585 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF564Q8TBZ8 553 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 HIST1H2ACQ93077 130 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 PHB2Q99623 299 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 MRPL9Q9BYD2 267 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 STOML1Q9UBI4 398 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ZNRF3Q9ULT6 936 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 PGRMC1O00264 195 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 RTN2O75298 545 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 BDNFP23560 247 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 AZGP1P25311 298 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 TIE1P35590 1138 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 PRCPP42785 496 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 C19orf57Q0VDD7 668 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 MTDHQ86UE4 582 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 MOSPD2Q8NHP6 518 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 IRX2Q9BZI1 471 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 FOXQ1Q9C009 403 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 BLOC1S4Q9NUP1 217 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF180Q9UJW8 692 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 C3orf70A6NLC5 250 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 KRT37O76014 449 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 FGL2Q14314 439 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 TLR1Q15399 786 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ILDR2Q71H61 639 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 SLITRK1Q96PX8 696 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 PHLPP2Q6ZVD8 1323 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 A0A0U1RQK1 487 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ANKRD34BA5PLL1 514 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ZBTB7BO15156 539 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ZW10O43264 779 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 GSTM5P46439 218 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 PDX1P52945 283 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 MPP2Q14168 576 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 AGKQ53H12 422 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ZCCHC12Q6PEW1 402 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 GALNT7Q86SF2 657 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 DHX40Q8IX18 779 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 CYP2W1Q8TAV3 490 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 UNC93B1Q9H1C4 597 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 FOXP1Q9H334 677 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 LCMT1Q9UIC8 334 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ABCC10Q5T3U5 1492 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 CHL1O00533 1208 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 SERPING1P05155 500 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 CYP21A2P08686 494 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 TSPAN19P0C672 248 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 ALDH4A1P30038 563 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 FASLGP48023 281 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 LAMB3Q13751 1172 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 GALNT3Q14435 633 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 OTUD3Q5T2D3 398 aaPredicted RBP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 USP53Q70EK8 1073 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 CDH24Q86UP0 819 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 MFRPQ9BY79 579 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 NARFQ9UHQ1 456 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 CROTQ9UKG9 612 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 DUSP10Q9Y6W6 482 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 PARD3Q8TEW0 1356 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 RGS10O43665 173 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 PGM3O95394 542 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 AQP1P29972 269 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 ADD2P35612 726 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 CHKAP35790 457 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 HARS2P49590 506 aaKnown RBP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 GPR15P49685 360 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 HNMTP50135 292 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 PRKCDQ05655 676 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 TRIM16LQ309B1 348 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 PEG10Q86TG7 708 aaKnown RBP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 TRIM74Q86UV6 250 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 HPS1Q92902 700 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 ROBO2Q9HCK4 1378 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 TRIP12Q14669 1992 aaPredicted RBP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 DRG2P55039 364 aaKnown RBP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 USP41Q3LFD5 358 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 SPIN3Q5JUX0 258 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 OR8K5Q8NH50 307 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 MAGEE2Q8TD90 523 aaPredicted RBP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 DMRTB1Q96MA1 342 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 CCNL2Q96S94 520 aaPredicted RBP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 MAGEB5Q9BZ81 275 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 FKRPQ9H9S5 495 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 CARD8Q9Y2G2 431 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 CRYL1Q9Y2S2 319 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 HCRTO43612 131 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 NR3C2P08235 984 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 GTF2H1P32780 548 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 EIF2B2P49770 351 aaKnown RBP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 FLT3LGP49771 235 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 MLF1P58340 268 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 DDR2Q16832 855 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 PHF21BQ96EK2 531 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 MNTQ99583 582 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 NKX2-4Q9H2Z4 354 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms