RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SPAARA0A1B0GVQ0 90 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 TTC26A0AVF1 554 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 BCLAF3A2AJT9 711 aaKnown RBP3.4□□□□□ -1.87
SLIRP-202ENST00000553981 LACTBL1A8MY62 500 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 ANKRD63C9JTQ0 380 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 K7EQS6 105 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 PRRG1O14668 218 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 TRDMT1O14717 391 aaKnown RBP3.4□□□□□ -1.87
SLIRP-202ENST00000553981 SYN3O14994 580 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 NCAM2O15394 837 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 CDC45O75419 566 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 C1QL1O75973 258 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 OAZ2O95190 189 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 ASMTLO95671 621 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 ESRRBO95718 433 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 PRB1P04280 392 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 ADRB2P07550 413 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 LTA4HP09960 611 aaKnown RBP3.4□□□□□ -1.87
SLIRP-202ENST00000553981 CXCL8P10145 99 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 HARSP12081 509 aaKnown RBP3.4□□□□□ -1.87
SLIRP-202ENST00000553981 MGAT1P26572 445 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 GABRR2P28476 465 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 LRPAP1P30533 357 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 OPRD1P41143 372 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 NAMPTP43490 491 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 ELLP55199 621 aaPredicted RBP3.4□□□□□ -1.87
SLIRP-202ENST00000553981 PEX3P56589 373 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 BLOC1S1P78537 153 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 CREMQ03060 361 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 RESTQ13127 1097 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 TFDP1Q14186 410 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 KRT32Q14532 448 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 PCBP1Q15365 356 aaKnown RBP eCLIP3.4□□□□□ -1.87
SLIRP-202ENST00000553981 CALCRLQ16602 461 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 BMT2Q1RMZ1 405 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 GPR158Q5T848 1215 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 PMS2CLQ68D20 193 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 TXNDC8Q6A555 127 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 RINT1Q6NUQ1 792 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 C19orf48Q6RUI8 117 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 C1orf186Q6ZWK4 172 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 OTUD6AQ7L8S5 288 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 LYSMD2Q8IV50 215 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 GLB1L2Q8IW92 636 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 DIS3L2Q8IYB7 885 aaKnown RBP3.4□□□□□ -1.87
SLIRP-202ENST00000553981 DEFB119Q8N690 84 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 DEPDC1BQ8WUY9 529 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 RLN3Q8WXF3 142 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 TFAP2CQ92754 450 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 PSMG2Q969U7 264 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 CAMK1GQ96NX5 476 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 FNBP1Q96RU3 617 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 PKMYT1Q99640 499 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 EDEM2Q9BV94 578 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 BHMT2Q9H2M3 363 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 TMEM30AQ9NV96 361 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 ORC3Q9UBD5 711 aaPredicted RBP3.4□□□□□ -1.87
SLIRP-202ENST00000553981 STK39Q9UEW8 545 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 DPP7Q9UHL4 492 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 PRSS50Q9UI38 385 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 TBX20Q9UMR3 447 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 PCDHA12Q9UN75 941 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 SLCO1B1Q9Y6L6 691 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 CACNA1GO43497 2377 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 CEP192Q8TEP8 1941 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 ATXN2Q99700 1313 aaKnown RBP3.4□□□□□ -1.87
SLIRP-202ENST00000553981 STK36Q9NRP7 1315 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 ANO9A1A5B4 782 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 PIRO00625 290 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 SLC16A4O15374 487 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 NEMFO60524 1076 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 PRAMEF4O60810 478 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 TMEM127O75204 238 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 ITGA10O75578 1167 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 GJB3O75712 270 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 RPP40O75818 363 aaKnown RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 CAVIN2O95810 425 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 HMGB1P09429 215 aaKnown RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 ITGAMP11215 1152 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 XRCC6P12956 609 aaKnown RBP eCLIP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 GCFC2P16383 781 aaKnown RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 RPA1P27694 616 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 KRT2P35908 639 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 PTGER3P43115 390 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 PGFP49763 221 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 NOVA1P51513 510 aaKnown RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 KPNA1P52294 538 aaPredicted RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 CACNA2D1P54289 1103 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 MANFP55145 182 aaKnown RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 PHC1P78364 1004 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 BNC1Q01954 994 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 AKAP17AQ02040 695 aaKnown RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 MEF2AQ02078 507 aaPredicted RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 CREB5Q02930 508 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 SCAPQ12770 1279 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 ELAVL2Q12926 359 aaKnown RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 GPR17Q13304 367 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 MPP3Q13368 585 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 PLD1Q13393 1074 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 RUNX3Q13761 415 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms