RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 KIF14Q15058 1648 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 E9PAM4 449 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 NEDD8-MDP1E9PL57 170 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 ATE1O95260 518 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 WARSP23381 471 aaKnown RBP9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 CNTFP26441 200 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 GP5P40197 560 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 CHRNDQ07001 517 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 ILF2Q12905 390 aaKnown RBP9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 BATFQ16520 125 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 HIF1AQ16665 826 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 USP51Q70EK9 711 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 ZNF677Q86XU0 584 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 CCDC185Q8N715 623 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 OR6C4Q8NGE1 309 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 TRMT10AQ8TBZ6 339 aaKnown RBP9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 NCSTNQ92542 709 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 POM121Q96HA1 1249 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 TPD52L3Q96J77 140 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 MECRQ9BV79 373 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 PIGUQ9H490 435 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 CAB39LQ9H9S4 337 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 SP110Q9HB58 689 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 U3KQV3 271 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 COMTP21964 271 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 RPL10AP62906 217 aaKnown RBP9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 ZNF124Q15973 351 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 ANKFN1Q8N957 763 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 RDM1Q8NG50 284 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 GRIN3AQ8TCU5 1115 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 GLT1D1Q96MS3 346 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 FAM129BQ96TA1 746 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 C17orf75Q9HAS0 396 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 CYP26B1Q9NR63 512 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 SCN3BQ9NY72 215 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 USE1Q9NZ43 259 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 SORCS3Q9UPU3 1222 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 A0A1W2PQC6 194 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 NOL4O94818 638 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC26A2P50443 739 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 AIF1P55008 147 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 CCNA1P78396 465 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 ILF3Q12906 894 aaKnown RBP eCLIP9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 TBCCQ15814 346 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 ALG11Q2TAA5 492 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 C4orf46Q504U0 113 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 PYDC2Q56P42 97 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 SLFN12LQ6IEE8 588 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 PCDH20Q8N6Y1 951 aaKnown RBP9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 KCTD6Q8NC69 237 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 COQ8AQ8NI60 647 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC44A1Q8WWI5 657 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 TADA1Q96BN2 335 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 MIPEPQ99797 713 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 EMILIN3Q9NT22 766 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 TRPM5Q9NZQ8 1165 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 PSMD13Q9UNM6 376 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 COG5Q9UP83 839 aa9.1□□□□□ -0.95
GTF2A1-203ENST00000553612 CTTNBP2Q8WZ74 1663 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 FRMPD4Q14CM0 1322 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC30A4O14863 429 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 SMAD9O15198 467 aaKnown RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 MOCS2O96007 188 aaPredicted RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 COILP38432 576 aaPredicted RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 EEF1A1P68104 462 aaKnown RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 EEF1A2Q05639 463 aaKnown RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 SKIV2LQ15477 1246 aaKnown RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 EEF1A1P5Q5VTE0 462 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 FBXL19Q6PCT2 694 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 UNC5AQ6ZN44 842 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 DNAAF3Q8N9W5 541 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 C14orf119Q9NWQ9 140 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 GRHL1Q9NZI5 618 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 INVSQ9Y283 1065 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 PCDHGB7Q9Y5F8 929 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 CCDC154A6NI56 674 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 EML1O00423 815 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 SH2B2O14492 632 aaPredicted RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 CSF2P04141 144 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 CD9P21926 228 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 BMP6P22004 513 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 RAB39AQ14964 217 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 ESCO2Q56NI9 601 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 C11orf63Q6NUN7 778 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 TBC1D10CQ8IV04 446 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 UPF1Q92900 1129 aaKnown RBP eCLIP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 C7orf50Q9BRJ6 194 aaKnown RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 NFKBIL1Q9UBC1 381 aaPredicted RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 KDM5CP41229 1560 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 PFASO15067 1338 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 PNMA8CA0A1B0GUJ8 204 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 A0A1W2PRQ8 180 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 NDUFS6O75380 124 aaKnown RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 NR3C2P08235 984 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 ACVR2BQ13705 512 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 TMEM151BQ8IW70 566 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 REM2Q8IYK8 340 aaPredicted RBP9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 TPCN2Q8NHX9 752 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 ZDHHC12Q96GR4 267 aa9.09□□□□□ -0.95
GTF2A1-203ENST00000553612 CDH22Q9UJ99 828 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms