RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TTC39CQ8N584 583 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 UBR7Q8N806 425 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 ZNF557Q8N988 423 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-219ENST00000553488 TMEM145Q8NBT3 493 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 OR4C6Q8NH72 309 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 OR14C36Q8NHC7 312 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 RNF139Q8WU17 664 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 KCTD13Q8WZ19 329 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 PTPRN2Q92932 1015 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 AZIN2Q96A70 460 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 NAF1Q96HR8 494 aaKnown RBP7.51□□□□□ -1.21
ATXN3-219ENST00000553488 FCRL2Q96LA5 508 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-219ENST00000553488 OMDQ99983 421 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 CNGB3Q9NQW8 809 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 ABCC13Q9NSE7 274 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 EXOC1Q9NV70 894 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 CYTH4Q9UIA0 394 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 SLCO3A1Q9UIG8 710 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 CA5BQ9Y2D0 317 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 FRMD4BQ9Y2L6 1034 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 DOCK4Q8N1I0 1966 aa7.51□□□□□ -1.21
ATXN3-219ENST00000553488 SPTBN1Q01082 2364 aaKnown RBP7.51□□□□□ -1.21
ATXN3-219ENST00000553488 UTP20O75691 2785 aaKnown RBP7.5□□□□□ -1.21
ATXN3-219ENST00000553488 O00370 1275 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 SLC7A4O43246 635 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 SART1O43290 800 aaKnown RBP7.5□□□□□ -1.21
ATXN3-219ENST00000553488 OPA1O60313 960 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 RTN2O75298 545 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 LUC7L3O95232 432 aaKnown RBP7.5□□□□□ -1.21
ATXN3-219ENST00000553488 CKMT1AP12532 417 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 DRD2P14416 443 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 VAV1P15498 845 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 DGKAP23743 735 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 NUDT1P36639 197 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 LSSP48449 732 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 SLC11A2P49281 568 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 STK19P49842 368 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-219ENST00000553488 MXI1P50539 228 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 OVGP1Q12889 678 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 ELAVL3Q14576 367 aaKnown RBP7.5□□□□□ -1.21
ATXN3-219ENST00000553488 ZCWPW2Q504Y3 356 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 SGO2Q562F6 1265 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 MS4A13Q5J8X5 152 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 KRT39Q6A163 491 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 NXPE4Q6UWF7 544 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 ZDHHC13Q8IUH4 622 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 FAM186BQ8IYM0 893 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 CLEC4CQ8WTT0 213 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 FRS2Q8WU20 508 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 KCNE4Q8WWG9 221 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 EEF2KMTQ96G04 330 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 MED8Q96G25 268 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 SLC39A13Q96H72 371 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 INTS4Q96HW7 963 aaKnown RBP7.5□□□□□ -1.21
ATXN3-219ENST00000553488 VCPIP1Q96JH7 1222 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 IPO9Q96P70 1041 aaKnown RBP7.5□□□□□ -1.21
ATXN3-219ENST00000553488 DEPDC7Q96QD5 511 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.5□□□□□ -1.21
ATXN3-219ENST00000553488 DNAI2Q9GZS0 605 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 MMRN2Q9H8L6 949 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 POLR1BQ9H9Y6 1135 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 ZFYVE1Q9HBF4 777 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 LRRC4Q9HBW1 653 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 UCKL1Q9NWZ5 548 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 TJP2Q9UDY2 1190 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 DMTF1Q9Y222 760 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 LRP4O75096 1905 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 CHD5Q8TDI0 1954 aa7.5□□□□□ -1.21
ATXN3-219ENST00000553488 TBC1D3DA0A087WVF3 549 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 TBC1D3IA0A087WXS9 549 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 TBC1D3EA0A087X179 549 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 TBC1D3KA0A087X1G2 549 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 TBC1D3FA6NER0 549 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-219ENST00000553488 TBC1D3LB9A6J9 549 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 K7ENP7 123 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 KLK10O43240 276 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 CALUO43852 315 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-219ENST00000553488 SLC28A2O43868 658 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 USP12O75317 370 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 CSO75390 466 aaKnown RBP7.49□□□□□ -1.21
ATXN3-219ENST00000553488 PIAS2O75928 621 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 IL1BP01584 269 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 FYNP06241 537 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 GP1BAP07359 652 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 TBC1D3HP0C7X1 549 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 SETSIPP0DME0 302 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 KRT10P13645 584 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 MAT2AP31153 395 aaKnown RBP7.49□□□□□ -1.21
ATXN3-219ENST00000553488 GTF2H1P32780 548 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 TBX4P57082 545 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 SLC8A3P57103 927 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 TAS2R38P59533 333 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 DAB2P98082 770 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 ECT2LQ008S8 904 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 SRSF1Q07955 248 aaKnown RBP eCLIP7.49□□□□□ -1.21
ATXN3-219ENST00000553488 CDH18Q13634 790 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 DCAF6Q58WW2 860 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 BROXQ5VW32 411 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 KIAA1614Q5VZ46 1190 aa7.49□□□□□ -1.21
ATXN3-219ENST00000553488 TBC1D3GQ6DHY5 549 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms