RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 KDELC1Q6UW63 502 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 KYAT3Q6YP21 454 aaKnown RBP9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 NLRP9Q7RTR0 991 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 DNAJB7Q7Z6W7 309 aaPredicted RBP9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 TRIM42Q8IWZ5 723 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 KLHDC8BQ8IXV7 354 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 GBP7Q8N8V2 638 aaPredicted RBP9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 ACVR1CQ8NER5 493 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 BHMTQ93088 406 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 PLD4Q96BZ4 506 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 EXOC2Q96KP1 924 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 CEP295NLQ96MC4 621 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 POLR1EQ9GZS1 481 aaKnown RBP9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 MYLK2Q9H1R3 596 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 ZNF395Q9H8N7 513 aaPredicted RBP9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 RC3H2Q9HBD1 1191 aaKnown RBP9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 HAUS2Q9NVX0 235 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 TMEM216Q9P0N5 145 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 DCDC2Q9UHG0 476 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 SLC12A4Q9UP95 1085 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 INSL5Q9Y5Q6 135 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 MYO7AQ13402 2215 aa9.2□□□□□ -0.94
RAB3IP-218ENST00000553099 A0A096LPK6 155 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 C2orf71A6NGG8 1288 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 TEX28O15482 410 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 BPGMP07738 259 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 MMP2P08253 660 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 GLDCP23378 1020 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 SERPINH1P50454 418 aaKnown RBP9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 IRF9Q00978 393 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 MTA1Q13330 715 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 GRM3Q14832 879 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 DDX53Q86TM3 631 aaKnown RBP9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 RNF135Q8IUD6 432 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 CMTR2Q8IYT2 770 aaKnown RBP9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 TMEM199Q8N511 208 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 WBP2Q969T9 261 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 IFT43Q96FT9 208 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 ECT2Q9H8V3 914 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 VPS45Q9NRW7 570 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 EMCNQ9ULC0 261 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 CHKBQ9Y259 395 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 HEATR9A2RTY3 570 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 CBX4O00257 560 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 CCL22O00626 93 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 MUSKO15146 869 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 PLIN3O60664 434 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 PRAMEF11O60813 436 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 DCTN3O75935 186 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 PRKCGP05129 697 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 RHOCP08134 193 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 CSE1LP55060 971 aaKnown RBP9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 CDH4P55283 916 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 SMAD3P84022 425 aaKnown RBP9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 RAB33AQ14088 237 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 GALNT3Q14435 633 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 IHHQ14623 411 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 USP10Q14694 798 aaKnown RBP9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 SNX30Q5VWJ9 437 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 FBXO46Q6PJ61 603 aaPredicted RBP9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 ARID3BQ8IVW6 561 aaPredicted RBP9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 TNS4Q8IZW8 715 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 PLD6Q8N2A8 252 aaKnown RBP9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 MYRFLQ96LU7 910 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 SLC22A12Q96S37 553 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 MUC3BQ9H195 1237 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 ATP13A1Q9HD20 1204 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 NSMCE4AQ9NXX6 385 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 SIRPGQ9P1W8 387 aa9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 AGO1Q9UL18 857 aaKnown RBP9.19□□□□□ -0.94
RAB3IP-218ENST00000553099 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 PHGDHO43175 533 aaKnown RBP9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 PIRTP0C851 137 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 ARNTP27540 789 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 HOXD9P28356 352 aaPredicted RBP9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 SLC1A2P43004 574 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 ARFIP2P53365 341 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 OXCT1P55809 520 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 ZNF177Q13360 481 aaPredicted RBP9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 FRG1Q14331 258 aaKnown RBP9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 SIRPB2Q5JXA9 342 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 ADGRF1Q5T601 910 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 CES4AQ5XG92 561 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 TXNDC8Q6A555 127 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 KLHDC10Q6PID8 442 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 CCDC91Q7Z6B0 441 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 ZC3HC1Q86WB0 502 aaKnown RBP9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 BBS5Q8N3I7 341 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 TEX26Q8N6G2 289 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 ARL14EPQ8N8R7 260 aaPredicted RBP9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 ANKLE1Q8NAG6 615 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 ARRDC2Q8TBH0 407 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 BLOC1S5Q8TDH9 187 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 ZBED2Q9BTP6 218 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 CINPQ9BW66 212 aaPredicted RBP9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 TMEM120AQ9BXJ8 343 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 PRKD2Q9BZL6 878 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 MAGEH1Q9H213 219 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 HSFX1Q9UBD0 423 aa9.18□□□□□ -0.94
RAB3IP-218ENST00000553099 PCDHB12Q9Y5F1 795 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms