RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 PATE3B3GLJ2 98 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 TBC1D3LB9A6J9 549 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 PSTPIP1O43586 416 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 TBC1D3HP0C7X1 549 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 KDELR1P24390 212 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 ITGB7P26010 798 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 NEK3P51956 506 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 ZNF235Q14590 738 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 MYLK3Q32MK0 819 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 TMCO4Q5TGY1 634 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 AGBL4Q5VU57 503 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 TBC1D3GQ6DHY5 549 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 TBC1D3CQ6IPX1 549 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 C11orf63Q6NUN7 778 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 ARHGAP36Q6ZRI8 547 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 ERN2Q76MJ5 926 aaKnown RBP18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 DAAM2Q86T65 1068 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 TMEM139Q8IV31 216 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 TBC1D3Q8IZP1 549 aaPredicted RBP18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 BBS5Q8N3I7 341 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 DNASE2BQ8WZ79 361 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 RAPGEF5Q92565 580 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 EXOC2Q96KP1 924 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 ZNF830Q96NB3 372 aaPredicted RBP18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 ZNF599Q96NL3 588 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 EDEM2Q9BV94 578 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 MAK16Q9BXY0 300 aaKnown RBP18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 KDM4CQ9H3R0 1056 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 LHX3Q9UBR4 397 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 SEPT3Q9UH03 358 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 CDV3Q9UKY7 258 aaKnown RBP18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 SLC6A14Q9UN76 642 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 CFAP54Q96N23 3096 aa18.76■□□□□ 0.59
PRPF40B-216ENST00000552301 A0A1B0GTW7 788 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 GOLGA6L3A6NEY3 463 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 PLRG1O43660 514 aaKnown RBP18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 MFSD11O43934 449 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 UGT2B4P06133 528 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 IL4RP24394 825 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 GKP32189 559 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 RENBPP51606 427 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 ATXN3P54252 364 aaPredicted RBP18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 CYTH1Q15438 398 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 NCBP2-AS2Q69YL0 99 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 FBXL19Q6PCT2 694 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 SLC23A3Q6PIS1 610 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 LRRC49Q8IUZ0 686 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 TP53INP2Q8IXH6 220 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 PAF1Q8N7H5 531 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 PCDH19Q8TAB3 1148 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 NETO1Q8TDF5 533 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 BIRC7Q96CA5 298 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 FAF2Q96CS3 445 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 HDAC8Q9BY41 377 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 REXO2Q9Y3B8 237 aaKnown RBP18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 ALG6Q9Y672 507 aa18.75■□□□□ 0.59
PRPF40B-216ENST00000552301 ZNF487B1APH4 448 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 BCAT2O15382 392 aaPredicted RBP18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 NRDCO43847 1150 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 SERPINF2P08697 491 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 SDHBP21912 280 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 CD27P26842 260 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 CCR5P51681 352 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 IRX4P78413 519 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 KIF5AQ12840 1032 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 LBRQ14739 615 aaKnown RBP18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 GRM3Q14832 879 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 PAFAH1B3Q15102 231 aaKnown RBP18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 IFI16Q16666 785 aaKnown RBP18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 ZNF805Q5CZA5 627 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 CFAP58Q5T655 872 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 PIP5KL1Q5T9C9 394 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 VSIG1Q86XK7 387 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 CCDC112Q8NEF3 446 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 TPCN2Q8NHX9 752 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 FAM131CQ96AQ9 280 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 DESI2Q9BSY9 194 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 GOLPH3Q9H4A6 298 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 GRPEL1Q9HAV7 217 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 PREBQ9HCU5 417 aa18.74■□□□□ 0.59
PRPF40B-216ENST00000552301 LNP1A1A4G5 178 aa18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 RCCD1A6NED2 376 aa18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 BTNL10A8MVZ5 291 aa18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 IGHV4-34P06331 123 aa18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 SYPP08247 313 aa18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 ADRB3P13945 408 aa18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 MX2P20592 715 aa18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 HSPA9P38646 679 aaKnown RBP18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 TEAD4Q15561 434 aa18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 GDPD4Q6W3E5 623 aa18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 PARS2Q7L3T8 475 aaKnown RBP18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 ADAT2Q7Z6V5 191 aaKnown RBP18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 PRPF39Q86UA1 669 aaKnown RBP18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 RFX6Q8HWS3 928 aa18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 RNF25Q96BH1 459 aaPredicted RBP18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 KLHL32Q96NJ5 620 aa18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 RNF157Q96PX1 679 aa18.73■□□□□ 0.59
PRPF40B-216ENST00000552301 CEP250Q9BV73 2442 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms