RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 M0QYV0 167 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 PDXKO00764 312 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 PRKCGP05129 697 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 VDRP11473 427 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 CD82P27701 267 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 UGT1A3P35503 534 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 ABL2P42684 1182 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 KLRB1Q12918 225 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 NNTQ13423 1086 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 ARHGAP44Q17R89 818 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 ATP1A1-AS1Q5TC04 95 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 KRT39Q6A163 491 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 DPY19L3Q6ZPD9 716 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 VPS36Q86VN1 386 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 FAM186BQ8IYM0 893 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 RCBTB1Q8NDN9 531 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 TSACCQ96A04 125 aaPredicted RBP14.7□□□□□ -0.06
VPS29-209ENST00000551655 RPRD1AQ96P16 312 aaPredicted RBP14.7□□□□□ -0.06
VPS29-209ENST00000551655 LENG8Q96PV6 779 aaPredicted RBP14.7□□□□□ -0.06
VPS29-209ENST00000551655 RDH14Q9HBH5 336 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 RAB20Q9NX57 234 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 VPS51Q9UID3 782 aa14.7□□□□□ -0.06
VPS29-209ENST00000551655 SYNJ2BP-COX16A0A087WUM0 186 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 KCNU1A8MYU2 1149 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 POLR2DO15514 142 aaKnown RBP14.69□□□□□ -0.06
VPS29-209ENST00000551655 OAS2P29728 719 aaKnown RBP14.69□□□□□ -0.06
VPS29-209ENST00000551655 EIF4A3P38919 411 aaKnown RBP14.69□□□□□ -0.06
VPS29-209ENST00000551655 OXCT1P55809 520 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 PPARDQ03181 441 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 DEFB109BQ30KR1 87 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 RABGAP1LQ5R372 815 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 KCTD16Q68DU8 428 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 C22orf39Q6P5X5 142 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 LCLAT1Q6UWP7 414 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 INTS8Q75QN2 995 aaKnown RBP14.69□□□□□ -0.06
VPS29-209ENST00000551655 RD3Q7Z3Z2 195 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 SPRED1Q7Z699 444 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 HID1Q8IV36 788 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 TMEM159Q96B96 161 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 TBATAQ96M53 351 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 CCDC114Q96M63 670 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 MUC3BQ9H195 1237 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 MBNL1Q9NR56 388 aaKnown RBP14.69□□□□□ -0.06
VPS29-209ENST00000551655 COX16Q9P0S2 106 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 VANGL2Q9ULK5 521 aa14.69□□□□□ -0.06
VPS29-209ENST00000551655 MORC2Q9Y6X9 1032 aaPredicted RBP14.69□□□□□ -0.06
VPS29-209ENST00000551655 ZNF891A8MT65 544 aaPredicted RBP14.68□□□□□ -0.06
VPS29-209ENST00000551655 ZNF821O75541 412 aaPredicted RBP14.68□□□□□ -0.06
VPS29-209ENST00000551655 CLDN1O95832 211 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 TRUB2O95900 331 aaKnown RBP14.68□□□□□ -0.06
VPS29-209ENST00000551655 IGLV3-25P01717 112 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 KRT13P13646 458 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 NR2F2P24468 414 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 BRD2P25440 801 aaKnown RBP14.68□□□□□ -0.06
VPS29-209ENST00000551655 ITGB7P26010 798 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 L1CAMP32004 1257 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 MXI1P50539 228 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 CUL2Q13617 745 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 PTK2BQ14289 1009 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 STK38Q15208 465 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 EFHC2Q5JST6 749 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 LRRC73Q5JTD7 316 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 TMEM164Q5U3C3 297 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 MACC1Q6ZN28 852 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 TICAM1Q8IUC6 712 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 CACNA2D3Q8IZS8 1091 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 ATP6V0D2Q8N8Y2 350 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 FBXL13Q8NEE6 735 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 CENPTQ96BT3 561 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 PPP1R16AQ96I34 528 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 CATSPER2Q96P56 530 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 EDEM3Q9BZQ6 932 aa14.68□□□□□ -0.06
VPS29-209ENST00000551655 ZSCAN16Q9H4T2 348 aaPredicted RBP14.68□□□□□ -0.06
VPS29-209ENST00000551655 RP1L1Q8IWN7 2480 aaPredicted RBP14.68□□□□□ -0.06
VPS29-209ENST00000551655 CHD5Q8TDI0 1954 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 VPS4BO75351 444 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 CNTN5O94779 1100 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 FGF3P11487 239 aaPredicted RBP14.67□□□□□ -0.06
VPS29-209ENST00000551655 CTSEP14091 401 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 ELAVL4P26378 380 aaKnown RBP14.67□□□□□ -0.06
VPS29-209ENST00000551655 GKP32189 559 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 NASPP49321 788 aaPredicted RBP14.67□□□□□ -0.06
VPS29-209ENST00000551655 CDC20Q12834 499 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 LRMPQ12912 555 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 AUHQ13825 339 aaKnown RBP14.67□□□□□ -0.06
VPS29-209ENST00000551655 RABEP1Q15276 862 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 ELOCQ15369 112 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 ALG11Q2TAA5 492 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 MAP9Q49MG5 647 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 TTC39BQ5VTQ0 682 aaPredicted RBP14.67□□□□□ -0.06
VPS29-209ENST00000551655 UNC5BQ8IZJ1 945 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 FSTL5Q8N475 847 aaPredicted RBP14.67□□□□□ -0.06
VPS29-209ENST00000551655 UBR7Q8N806 425 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 LINC00301Q8NCQ3 95 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 DENND6BQ8NEG7 585 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 GPR156Q8NFN8 814 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 SCG3Q8WXD2 468 aaKnown RBP14.67□□□□□ -0.06
VPS29-209ENST00000551655 EXOC1Q9NV70 894 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 VPS4AQ9UN37 437 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms