RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 OR4C6Q8NH72 309 aa17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 RFFLQ8WZ73 363 aa17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 HECAQ9UBI9 543 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-205ENST00000548650 BAHCC1Q9P281 2608 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 COL27A1Q8IZC6 1860 aaPredicted RBP17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 RAD51BO15315 384 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 RAMP2O60895 175 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 GSRP00390 522 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 CALB1P05937 261 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 JUPP14923 745 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 GPD1P21695 349 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 GEMIN4P57678 1058 aaKnown RBP17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 TARDBPQ13148 414 aaKnown RBP eCLIP17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 APTXQ7Z2E3 356 aaKnown RBP17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 PTAR1Q7Z6K3 402 aaPredicted RBP17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 NEK11Q8NG66 645 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 OR2AP1Q8NGE2 309 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 HNRNPLLQ8WVV9 542 aaKnown RBP17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 BMFQ96LC9 184 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 ERGIC2Q96RQ1 377 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 SELENOOQ9BVL4 669 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 SLC17A9Q9BYT1 436 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 MAGEH1Q9H213 219 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 HSD3B7Q9H2F3 369 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 NOL6Q9H6R4 1146 aaKnown RBP17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 GGT7Q9UJ14 662 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 ITM2BQ9Y287 266 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 LRRK1Q38SD2 2015 aa17.69■□□□□ 0.42
CHMP1A-205ENST00000548650 LOC400499M0QZD8 3231 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 A0A087WV48 116 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 POM121BA6NF01 834 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 C16orf96A6NNT2 1141 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 FFAR2O15552 330 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 CCP110O43303 1012 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 INSM1Q01101 510 aaPredicted RBP17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 MAPK8IP2Q13387 824 aaPredicted RBP17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 STX1AQ16623 288 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 WDR59Q6PJI9 974 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 LEKR1Q6ZMV7 388 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 Q6ZSR6 202 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 ZSCAN30Q86W11 494 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 PYROXD2Q8N2H3 581 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 FAM174AQ8TBP5 190 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 IFT43Q96FT9 208 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 LRIG1Q96JA1 1093 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 KLF6Q99612 283 aaPredicted RBP17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 C1QTNF2Q9BXJ5 285 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 ANO10Q9NW15 660 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 HS3ST3A1Q9Y663 406 aa17.68■□□□□ 0.42
CHMP1A-205ENST00000548650 FASNP49327 2511 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 SIGLEC16A6NMB1 481 aa17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 ANP32AP39687 249 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 C1QBPQ07021 282 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 FZD2Q14332 565 aa17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 NCAPHQ15003 741 aa17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 POLD3Q15054 466 aaPredicted RBP17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 ZNF805Q5CZA5 627 aa17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 PPP1R15BQ5SWA1 713 aa17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 ATXN7L2Q5T6C5 722 aaPredicted RBP17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 DNAJC24Q6P3W2 148 aa17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 KDM7AQ6ZMT4 941 aa17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 SLFN11Q7Z7L1 901 aa17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 RYBPQ8N488 228 aaPredicted RBP17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 RTL3Q8N8U3 475 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 ANKRD20A12PQ8NF67 263 aa17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 RAB7BQ96AH8 199 aa17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 FEM1CQ96JP0 617 aa17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 PCMTD1Q96MG8 357 aaPredicted RBP17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 SEPT11Q9NVA2 429 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-205ENST00000548650 PTPRQQ9UMZ3 2332 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 LY6G6EA0A0G2JKS1 128 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 KRIT1O00522 736 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 TSPAN6O43657 245 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 KDELR3O43731 214 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 TMCC1O94876 653 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 PAK4O96013 591 aaPredicted RBP17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 UGT2B4P06133 528 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 NME1P15531 152 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 ZNF143P52747 638 aaPredicted RBP17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 SNRPD1P62314 119 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 DAB2P98082 770 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 UBXN1Q04323 297 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 RTP5Q14D33 572 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 ZNF542PQ5EBM4 170 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 EFHC2Q5JST6 749 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 TPRG1LQ5T0D9 272 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 SASS6Q6UVJ0 657 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 PARGQ86W56 976 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 DCP2Q8IU60 420 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 CACTIN-AS1Q8N1I8 211 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 DCBLD1Q8N8Z6 715 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 BAP1Q92560 729 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 MCEEQ96PE7 176 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 GBP4Q96PP9 640 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 AGPAT1Q99943 283 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 OSBPL1AQ9BXW6 950 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 NRSN2Q9GZP1 204 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 KLC2Q9H0B6 622 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 DNAJC28Q9NX36 388 aa17.66■□□□□ 0.42
CHMP1A-205ENST00000548650 NLGN3Q9NZ94 848 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms