RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 CD300AQ9UGN4 299 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 ACOT9Q9Y305 439 aa23.4■■□□□ 1.34
NPAS3-206ENST00000548645 C19orf81C9J6K1 198 aa23.39■■□□□ 1.34
NPAS3-206ENST00000548645 HSPA8P11142 646 aaKnown RBP23.39■■□□□ 1.34
NPAS3-206ENST00000548645 PTPN3P26045 913 aa23.39■■□□□ 1.34
NPAS3-206ENST00000548645 SULT1E1P49888 294 aa23.39■■□□□ 1.34
NPAS3-206ENST00000548645 BST2Q10589 180 aaKnown RBP23.39■■□□□ 1.34
NPAS3-206ENST00000548645 FAM187BQ17R55 369 aa23.39■■□□□ 1.34
NPAS3-206ENST00000548645 ARHGAP17Q68EM7 881 aa23.39■■□□□ 1.34
NPAS3-206ENST00000548645 PACRGLQ8N7B6 248 aa23.39■■□□□ 1.34
NPAS3-206ENST00000548645 COX4I2Q96KJ9 171 aa23.39■■□□□ 1.34
NPAS3-206ENST00000548645 GPR20Q99678 358 aa23.39■■□□□ 1.34
NPAS3-206ENST00000548645 FTHL17Q9BXU8 183 aa23.39■■□□□ 1.34
NPAS3-206ENST00000548645 COL4A5P29400 1685 aa23.39■■□□□ 1.34
NPAS3-206ENST00000548645 FASTKQ14296 549 aaKnown RBP23.39■■□□□ 1.33
NPAS3-206ENST00000548645 NT5DC4Q86YG4 428 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 CENPLQ8N0S6 344 aaPredicted RBP23.39■■□□□ 1.33
NPAS3-206ENST00000548645 SETD4Q9NVD3 440 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 GTSE1Q9NYZ3 720 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 GOLGA8TH3BQL2 631 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 SOCS2O14508 198 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 AKAP10O43572 662 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 TIPRLO75663 272 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 AVPR1AP37288 418 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 MATKP42679 507 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 SLC5A3P53794 718 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 AGKQ53H12 422 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 PIWIL4Q7Z3Z4 852 aaKnown RBP23.39■■□□□ 1.33
NPAS3-206ENST00000548645 DHFR2Q86XF0 187 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 KIF12Q96FN5 646 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 CPB2Q96IY4 423 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 TMEM165Q9HC07 324 aa23.39■■□□□ 1.33
NPAS3-206ENST00000548645 FBP2O00757 339 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 EDNRBP24530 442 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 SPIDRQ14159 915 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 ZNF829Q3KNS6 432 aaPredicted RBP23.38■■□□□ 1.33
NPAS3-206ENST00000548645 SLC25A52Q3SY17 297 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 NIM1KQ8IY84 436 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 MFSD2AQ8NA29 543 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 PAIP1Q9H074 479 aaKnown RBP23.38■■□□□ 1.33
NPAS3-206ENST00000548645 SNX25Q9H3E2 840 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 ARMC1Q9NVT9 282 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 TTKP33981 857 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 ACADSBP45954 432 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 BCAT1P54687 386 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 NME5P56597 212 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 KCTD11Q693B1 232 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 EEPD1Q7L9B9 569 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 CAMK1DQ8IU85 385 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 FAR2Q96K12 515 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 CROTQ9UKG9 612 aa23.38■■□□□ 1.33
NPAS3-206ENST00000548645 CYP2B6P20813 491 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 MYF6P23409 242 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 MAGEA10P43363 369 aaPredicted RBP23.37■■□□□ 1.33
NPAS3-206ENST00000548645 ZBTB17Q13105 803 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 C6orf10Q5SRN2 563 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 PDZD4Q76G19 769 aaPredicted RBP23.37■■□□□ 1.33
NPAS3-206ENST00000548645 ERMP1Q7Z2K6 904 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 AFAP1L2Q8N4X5 818 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 ZNF420Q8TAQ5 688 aaPredicted RBP23.37■■□□□ 1.33
NPAS3-206ENST00000548645 SPPL2BQ8TCT7 592 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 CDC14AQ9UNH5 594 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 NME7Q9Y5B8 376 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 ZNF839A8K0R7 811 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 GIPC1O14908 333 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 UBDO15205 165 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 CLASP2O75122 1294 aaKnown RBP23.37■■□□□ 1.33
NPAS3-206ENST00000548645 SRP72O76094 671 aaKnown RBP23.37■■□□□ 1.33
NPAS3-206ENST00000548645 SNRPB2P08579 225 aaKnown RBP23.37■■□□□ 1.33
NPAS3-206ENST00000548645 PGGT1BP53609 377 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 AMHR2Q16671 573 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 TP53INP2Q8IXH6 220 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 DEFB106AQ8N104 65 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 OR6B3Q8NGW1 331 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 HMGCLL1Q8TB92 370 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 CXorf21Q9HAI6 301 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 CCDC167Q9P0B6 97 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 TMEM181Q9P2C4 612 aa23.37■■□□□ 1.33
NPAS3-206ENST00000548645 EEF2KO00418 725 aaKnown RBP23.36■■□□□ 1.33
NPAS3-206ENST00000548645 MRASO14807 208 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 IDO1P14902 403 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 ZNF12P17014 697 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 NMBRP28336 390 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 ADORA2BP29275 332 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 EPHX2P34913 555 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 PHEXP78562 749 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 CTBSQ01459 385 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 ANKDD1AQ495B1 522 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 UNC93AQ86WB7 457 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 SLC41A1Q8IVJ1 513 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 TERB1Q8NA31 727 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 OR2T34Q8NGX1 318 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 OR2T3Q8NH03 318 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 SLC25A23Q9BV35 468 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 CLEC11AQ9Y240 323 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 RPL10P27635 214 aaKnown RBP23.36■■□□□ 1.33
NPAS3-206ENST00000548645 CXCL9Q07325 125 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 UGP2Q16851 508 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 MAP7D1Q3KQU3 841 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 PDCD4Q53EL6 469 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms