RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 RNF169Q8NCN4 708 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 DPF3Q92784 378 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 GFM2Q969S9 779 aaKnown RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 ATP6V1E2Q96A05 226 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 PGAP3Q96FM1 320 aaPredicted RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 FAR2Q96K12 515 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 DNAJC1Q96KC8 554 aaKnown RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 MARK4Q96L34 752 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 UHRF1Q96T88 793 aaPredicted RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 APOL2Q9BQE5 337 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 MRPL46Q9H2W6 279 aaKnown RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 PREBQ9HCU5 417 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 GALNT8Q9NY28 637 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 ADA2Q9NZK5 511 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 FBXW11Q9UKB1 542 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 SQORQ9Y6N5 450 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 C7orf72A4D263 438 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 GOLGA8TH3BQL2 631 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 H3BRB1 525 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 TRIM24O15164 1050 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 HNRNPRO43390 633 aaKnown RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 HUS1O60921 280 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 TRMUO75648 421 aaKnown RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 FYNP06241 537 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 FAM200BP0CF97 657 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 ZNF286BP0CG31 522 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 CCDC166P0CW27 439 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 CDK4P11802 303 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 STMN1P16949 149 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 SAT1P21673 171 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 SLC5A2P31639 672 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 NDUFV1P49821 464 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 TKTL1P51854 596 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 CDC42EP1Q00587 391 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 ZNF33AQ06730 810 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 LRP8Q14114 963 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 SQLEQ14534 574 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 PCBP1Q15365 356 aaKnown RBP eCLIP10□□□□□ -0.813e-7■■■■■ 30.1
SMARCD1-205ENST00000548573 GRIK4Q16099 956 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 ARL13BQ3SXY8 428 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 PCID2Q5JVF3 399 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 TAPT1Q6NXT6 567 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 PKN3Q6P5Z2 889 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 MAMDC4Q6UXC1 1216 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 ISLR2Q6UXK2 745 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 CATSPER4Q7RTX7 472 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 AMIGO2Q86SJ2 522 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 CARM1Q86X55 608 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 SLC41A1Q8IVJ1 513 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 CCDC117Q8IWD4 279 aaPredicted RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 TOP6BLQ8N6T0 577 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 TSPAN14Q8NG11 270 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 TRPC4APQ8TEL6 797 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 MRPL57Q9BQC6 102 aaKnown RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 FTHL17Q9BXU8 183 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 ADAMTS10Q9H324 1103 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 TUT1Q9H6E5 874 aaKnown RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 COQ10BQ9H8M1 238 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 ANLNQ9NQW6 1124 aa10□□□□□ -0.81
SMARCD1-205ENST00000548573 DDX18Q9NVP1 670 aaKnown RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 IPO11Q9UI26 975 aaKnown RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 MAGED2Q9UNF1 606 aaPredicted RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 AAR2Q9Y312 384 aaKnown RBP10□□□□□ -0.81
SMARCD1-205ENST00000548573 SBF1O95248 1867 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 BRCA1P38398 1863 aaKnown RBP9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 PDCD11Q14690 1871 aaKnown RBP9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 NRCAMQ92823 1304 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 A0A087X1B8 175 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 SMIM28A0A1B0GU29 152 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 MYOCOSA0A1B0GUC4 107 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 FAM95CA0A1B0GW59 222 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 TCRBV3S1A0A5B6 114 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 ARHGEF37A1IGU5 675 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 KCNU1A8MYU2 1149 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 H3BSA7 217 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 I6L893 689 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 TRPA1O75762 1119 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 BEST1O76090 585 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 H6PDO95479 791 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 PGK1P00558 417 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 TCN1P20061 433 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 ATP5F1P24539 256 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 PCSK6P29122 969 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 SLC7A1P30825 629 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 AVPR1AP37288 418 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 ALDH3B2P48448 385 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 ATXN3P54252 364 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 TUBA4AP68366 448 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 CCNA1P78396 465 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 PSMD5Q16401 504 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 GJC2Q5T442 439 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 GK5Q6ZS86 529 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 CLEC20AQ6ZU45 233 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 HFE2Q6ZVN8 426 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 PAQR9Q6ZVX9 377 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 OSTM1Q86WC4 334 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 AFAP1L2Q8N4X5 818 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 CCNYL1Q8N7R7 359 aa9.99□□□□□ -0.81
SMARCD1-205ENST00000548573 FAM156AQ8NDB6 213 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms