RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 RAMP2O60895 175 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 C1SP09871 688 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 GIMD1P0DJR0 217 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 HOXB3P14651 431 aaPredicted RBP13.57□□□□□ -0.24
CPSF6-204ENST00000547486 CKMT2P17540 419 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 ETFBP38117 255 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 ABL2P42684 1182 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 RPS21P63220 83 aaKnown RBP13.57□□□□□ -0.24
CPSF6-204ENST00000547486 OGDHQ02218 1023 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 POLD3Q15054 466 aaPredicted RBP13.57□□□□□ -0.24
CPSF6-204ENST00000547486 MYLK3Q32MK0 819 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 PROX2Q3B8N5 592 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 CCDC183Q5T5S1 534 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 ATXN7L2Q5T6C5 722 aaPredicted RBP13.57□□□□□ -0.24
CPSF6-204ENST00000547486 ACAD10Q6JQN1 1059 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 SCYL2Q6P3W7 929 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 KDM7AQ6ZMT4 941 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 MCOLN2Q8IZK6 566 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 RYBPQ8N488 228 aaPredicted RBP13.57□□□□□ -0.24
CPSF6-204ENST00000547486 AOPEPQ8N6M6 819 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 PDCD7Q8N8D1 485 aaKnown RBP13.57□□□□□ -0.24
CPSF6-204ENST00000547486 FEM1CQ96JP0 617 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 MCEEQ96PE7 176 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 SYT11Q9BT88 431 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 CALN1Q9BXU9 219 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 DKK4Q9UBT3 224 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 GGT7Q9UJ14 662 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 FZD10Q9ULW2 581 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 ITM2BQ9Y287 266 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 HS3ST3A1Q9Y663 406 aa13.57□□□□□ -0.24
CPSF6-204ENST00000547486 PKD1L2Q7Z442 2459 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 COL5A1P20908 1838 aaPredicted RBP13.56□□□□□ -0.24
CPSF6-204ENST00000547486 IGLON5A6NGN9 336 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 C16orf96A6NNT2 1141 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 KRIT1O00522 736 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 BUB1O43683 1085 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 AP1G1O43747 822 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 MYF5P13349 255 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 JUPP14923 745 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 ITIH2P19823 946 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 EPHB2P29323 1055 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 TYRO3Q06418 890 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 TARDBPQ13148 414 aaKnown RBP eCLIP13.56□□□□□ -0.24
CPSF6-204ENST00000547486 ZNF211Q13398 564 aaPredicted RBP13.56□□□□□ -0.24
CPSF6-204ENST00000547486 ZNF805Q5CZA5 627 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 KIAA1161Q6NSJ0 714 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 DNAJC24Q6P3W2 148 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 DNAAF5Q86Y56 855 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 RTL3Q8N8U3 475 aaKnown RBP13.56□□□□□ -0.24
CPSF6-204ENST00000547486 OR2AP1Q8NGE2 309 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 KLF6Q99612 283 aaPredicted RBP13.56□□□□□ -0.24
CPSF6-204ENST00000547486 C1QTNF2Q9BXJ5 285 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 GPR27Q9NS67 375 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 TMEM63CQ9P1W3 806 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 HPCAL4Q9UM19 191 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 DOCK4Q8N1I0 1966 aa13.56□□□□□ -0.24
CPSF6-204ENST00000547486 FFAR2O15552 330 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 CREB3O43889 395 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 PIAS2O75928 621 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 TMCC1O94876 653 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 POP4O95707 220 aaKnown RBP13.55□□□□□ -0.24
CPSF6-204ENST00000547486 GSRP00390 522 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 UGT2B4P06133 528 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 CDK4P11802 303 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 FERP16591 822 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 ACP1P24666 158 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 GEMIN4P57678 1058 aaKnown RBP13.55□□□□□ -0.24
CPSF6-204ENST00000547486 FZD2Q14332 565 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 COL28A1Q2UY09 1125 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 EFHC2Q5JST6 749 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 TPRG1LQ5T0D9 272 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 HES3Q5TGS1 186 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 HNRNPLLQ8WVV9 542 aaKnown RBP13.55□□□□□ -0.24
CPSF6-204ENST00000547486 HMCESQ96FZ2 354 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 LRIG1Q96JA1 1093 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 KLHL32Q96NJ5 620 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 LENG8Q96PV6 779 aaPredicted RBP13.55□□□□□ -0.24
CPSF6-204ENST00000547486 CNPY3Q9BT09 278 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 RTN4Q9NQC3 1192 aaKnown RBP13.55□□□□□ -0.24
CPSF6-204ENST00000547486 KLF15Q9UIH9 416 aa13.55□□□□□ -0.24
CPSF6-204ENST00000547486 NBEAQ8NFP9 2946 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 SPTY2D1-AS1A0A0U1RR47 76 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 A6NNZ2 444 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 WASH4PA8MWX3 477 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 TMCO5BA8MYB1 307 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 RASA4BC9J798 803 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 GOLGA6L22H0YM25 854 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 AREL1O15033 823 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 INSIG1O15503 277 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 RASA4O43374 803 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 TSPAN6O43657 245 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 TNFAIP3P21580 790 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 SNRPD1P62314 119 aaKnown RBP13.54□□□□□ -0.24
CPSF6-204ENST00000547486 INSM1Q01101 510 aaPredicted RBP13.54□□□□□ -0.24
CPSF6-204ENST00000547486 SGCGQ13326 291 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 ILKQ13418 452 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 MAMLD1Q13495 774 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 SERINC3Q13530 473 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 CYTH1Q15438 398 aa13.54□□□□□ -0.24
CPSF6-204ENST00000547486 ANO6Q4KMQ2 910 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms