RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 OXSMQ9NWU1 459 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 TLK1Q9UKI8 766 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 ERVK-11Q9UQG0 969 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 MFHAS1Q9Y4C4 1052 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 PCDHA10Q9Y5I2 948 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 UBIAD1Q9Y5Z9 338 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 FOCADQ5VW36 1801 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 TCRBV3S1A0A5B6 114 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 ZBBXA8MT70 800 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 HNRNPLP14866 589 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMG8-202ENST00000543872 KCNA2P16389 499 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 CYP2F1P24903 491 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 ELK4P28324 431 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 NR4A2P43354 598 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 JAK3P52333 1124 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 ZNF143P52747 638 aaPredicted RBP12.82□□□□□ -0.36
SMG8-202ENST00000543872 RFTN1Q14699 578 aaPredicted RBP12.82□□□□□ -0.36
SMG8-202ENST00000543872 REP15Q6BDI9 236 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 EPHX4Q8IUS5 362 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMG8-202ENST00000543872 ANKFN1Q8N957 763 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 LGMNQ99538 433 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 CACNA2D2Q9NY47 1150 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 KLQ9UEF7 1012 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 PSME2Q9UL46 239 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 RUVBL2Q9Y230 463 aaKnown RBP12.82□□□□□ -0.36
SMG8-202ENST00000543872 TCAF1Q9Y4C2 921 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 TRAF6Q9Y4K3 522 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 GUCY1B2O75343 617 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 POLBP06746 335 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 TPSB2P20231 275 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 CLCQ05315 142 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 TPSAB1Q15661 275 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 ERMP1Q7Z2K6 904 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 MCF2L2Q86YR7 1114 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 SPNS2Q8IVW8 549 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 ADAMTS16Q8TE57 1224 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 ARNTL2Q8WYA1 636 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 SNRNP25Q9BV90 132 aaKnown RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 TRIM8Q9BZR9 551 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMG8-202ENST00000543872 C9JVG2 144 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 DGAT1O75907 488 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 ALDH1A2O94788 518 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 PGAM1P18669 254 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 IL10P22301 178 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 LRPAP1P30533 357 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 SELENBP1Q13228 472 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 OTUD3Q5T2D3 398 aaPredicted RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 GRTP1Q5TC63 336 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 CYP4V2Q6ZWL3 525 aaPredicted RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 FRA10AC1Q70Z53 315 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 CDR2LQ86X02 465 aaPredicted RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 OR2T34Q8NGX1 318 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 OR2T3Q8NH03 318 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 FCRL3Q96P31 734 aaPredicted RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 MROQ9BYG7 248 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 ING2Q9H160 280 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 MRPL40Q9NQ50 206 aaKnown RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 MED7O43513 233 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 SYNCRIPO60506 623 aaKnown RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 SRP72O76094 671 aaKnown RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 ENDOD1O94919 500 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 CHEK2O96017 543 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 ENO2P09104 434 aaPredicted RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 TGM2P21980 687 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 FASP25445 335 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 CDH5P33151 784 aaPredicted RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 PIGFQ07326 219 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 HERC3Q15034 1050 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 INAVAQ3KP66 663 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 SLFN12LQ6IEE8 588 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 CCDC60Q8IWA6 550 aaPredicted RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 CCNYQ8ND76 341 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 SGCDQ92629 289 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 RTP4Q96DX8 246 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 SH3YL1Q96HL8 342 aaPredicted RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 ZNF668Q96K58 619 aaPredicted RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 HEXIM2Q96MH2 286 aaKnown RBP12.81□□□□□ -0.36
SMG8-202ENST00000543872 CSF3RQ99062 836 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 AASDHPPTQ9NRN7 309 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 HMGXB4Q9UGU5 601 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 SNX9Q9Y5X1 595 aa12.81□□□□□ -0.36
SMG8-202ENST00000543872 DHRS12A0PJE2 317 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 MICAL2O94851 1124 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 IL18RAPO95256 599 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 ATG7O95352 703 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 SNAP29O95721 258 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 EDN1P05305 212 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 CHRNB1P11230 501 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 BMP2P12643 396 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 GNL1P36915 607 aaPredicted RBP12.8□□□□□ -0.36
SMG8-202ENST00000543872 MAGEA6P43360 314 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 PRKAA2P54646 552 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 LSM3P62310 102 aaKnown RBP12.8□□□□□ -0.36
SMG8-202ENST00000543872 ZNF846Q147U1 533 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 PPP1R3AQ16821 1122 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 DUOXA2Q1HG44 320 aa12.8□□□□□ -0.36
SMG8-202ENST00000543872 SLC36A3Q495N2 470 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms