RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 BBS5Q8N3I7 341 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 CHST14Q8NCH0 376 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 ASB12Q8WXK4 309 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 CTNNBL1Q8WYA6 563 aaPredicted RBP10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 ARRDC3Q96B67 414 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 SLC6A18Q96N87 628 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 TUBGCP5Q96RT8 1024 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 ELF4Q99607 663 aaPredicted RBP10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 DNAJC7Q99615 494 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 C1QTNF7Q9BXJ2 289 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 CPEB1Q9BZB8 566 aaKnown RBP10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 TM6SF2Q9BZW4 377 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 FSCN3Q9NQT6 498 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 NDFIP2Q9NV92 336 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 HAUS2Q9NVX0 235 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 RCOR3Q9P2K3 495 aaPredicted RBP10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 DKK3Q9UBP4 350 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 ANAPC7Q9UJX3 599 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 SNX11Q9Y5W9 270 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 CACNA1AO00555 2505 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 GON4LQ3T8J9 2241 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 VPS13AQ96RL7 3174 aa10.45□□□□□ -0.74
NPIPB4-217ENST00000543449 CACNA1EQ15878 2313 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 A0A087X0T9 212 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 A0A1B0GTQ1 180 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 A0A1W2PQ67 120 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 A0A1W2PQU0 124 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 KRIT1O00522 736 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 NEMP1O14524 444 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 TOR1BO14657 336 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 SH3BP5O60239 455 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 PRAMEF11O60813 436 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 ZNF821O75541 412 aaPredicted RBP10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 CD160O95971 181 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 FAM228BP0C875 321 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 ERCC2P18074 760 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 XPAP23025 273 aaPredicted RBP10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 NFKBIAP25963 317 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 HSPA9P38646 679 aaKnown RBP10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 RXRGP48443 463 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 CSNK1DP48730 415 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 NXPH1P58417 271 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 PPP2CBP62714 309 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 PPP2CAP67775 309 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 SIM1P81133 766 aaPredicted RBP10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 BNC1Q01954 994 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 ELP6Q0PNE2 266 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 SGCGQ13326 291 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 DPYSL2Q16555 572 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 SLC18A3Q16572 532 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 HS1BP3Q53T59 392 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 PPP6R3Q5H9R7 873 aaPredicted RBP10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 CFAP58Q5T655 872 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 GDPD4Q6W3E5 623 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 VSTM4Q8IW00 320 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 MAP7D3Q8IWC1 876 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 DENND6BQ8NEG7 585 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 RHBDD1Q8TEB9 315 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 SETD7Q8WTS6 366 aaKnown RBP10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 NSMCE1Q8WV22 266 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 IFT43Q96FT9 208 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 HMCESQ96FZ2 354 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 KLHDC7BQ96G42 594 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 ZNF641Q96N77 438 aaPredicted RBP10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 ZNF599Q96NL3 588 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 NUP85Q9BW27 656 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 THAP2Q9H0W7 228 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 LRRC19Q9H756 370 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 SP110Q9HB58 689 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 ARHGAP20Q9P2F6 1191 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 PCOLCE2Q9UKZ9 415 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 FNDC3AQ9Y2H6 1198 aaKnown RBP10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 HS3ST3A1Q9Y663 406 aa10.44□□□□□ -0.74
NPIPB4-217ENST00000543449 DMDP11532 3685 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 NYNRINQ9P2P1 1898 aaKnown RBP10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 C16orf96A6NNT2 1141 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 H0Y8X5 98 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 RIOK3O14730 519 aaKnown RBP10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 AKR1B10O60218 316 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 ITGAVP06756 1048 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 MAT2AP31153 395 aaKnown RBP10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 TAS2R38P59533 333 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 IL10RBQ08334 325 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 NSUN2Q08J23 767 aaKnown RBP eCLIP10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 KRT81Q14533 505 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 ZNF284Q2VY69 593 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 POM121L1PQ3SYA9 428 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 BRAT1Q6PJG6 821 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 TMCO3Q6UWJ1 677 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 ARFGAP1Q8N6T3 406 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 OR2I1PQ8NGU4 316 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 ZNF564Q8TBZ8 553 aaPredicted RBP10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 CCDC42Q96M95 316 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 LENG8Q96PV6 779 aaPredicted RBP10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 KCTD15Q96SI1 283 aaPredicted RBP10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 CINPQ9BW66 212 aaPredicted RBP10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 NOL6Q9H6R4 1146 aaKnown RBP10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 EVA1BQ9NVM1 165 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 GPATCH2LQ9NWQ4 482 aa10.43□□□□□ -0.74
NPIPB4-217ENST00000543449 CTTNBP2NLQ9P2B4 639 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms