RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 RPS6KA3P51812 740 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 POLGP54098 1239 aaPredicted RBP4.33□□□□□ -1.72
MDM2-229ENST00000543046 ARL4CP56559 192 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 TRAF1Q13077 416 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 HNRNPA0Q13151 305 aaKnown RBP4.33□□□□□ -1.72
MDM2-229ENST00000543046 THOC5Q13769 683 aaKnown RBP4.33□□□□□ -1.72
MDM2-229ENST00000543046 PTGR1Q14914 329 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 ZRSR1Q15695 479 aaKnown RBP4.33□□□□□ -1.72
MDM2-229ENST00000543046 C5orf22Q49AR2 442 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 LDHAL6AQ6ZMR3 332 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 GPSM1Q86YR5 675 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 BRSK2Q8IWQ3 736 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 EFCAB13Q8IY85 973 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 TMEM57Q8N5G2 664 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 SLC25A41Q8N5S1 370 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 ANKRD42Q8N9B4 389 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 CCDC191Q8NCU4 936 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 LINS1Q8NG48 757 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 CADM1Q9BY67 442 aaKnown RBP4.33□□□□□ -1.72
MDM2-229ENST00000543046 HIPK3Q9H422 1215 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 TTC12Q9H892 705 aaPredicted RBP4.33□□□□□ -1.72
MDM2-229ENST00000543046 ACTR5Q9H9F9 607 aaPredicted RBP4.33□□□□□ -1.72
MDM2-229ENST00000543046 MAP6D1Q9H9H5 199 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 PNRC2Q9NPJ4 139 aaKnown RBP4.33□□□□□ -1.72
MDM2-229ENST00000543046 RNF146Q9NTX7 359 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 PCDHGB3Q9Y5G1 929 aa4.33□□□□□ -1.72
MDM2-229ENST00000543046 KDM5CP41229 1560 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 TEX14Q8IWB6 1497 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 FGD6Q6ZV73 1430 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 GPRASP1Q5JY77 1395 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 CCDC171Q6TFL3 1326 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 SYCE3A1L190 88 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 FAM90A10PA6NDY2 464 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 TMEM247A6NEH6 219 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 CD8B2A6NJW9 211 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 STX16-NPEPL1H3BU86 382 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 STX16O14662 325 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 MDM4O15151 490 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 SLU7O95391 586 aaKnown RBP4.32□□□□□ -1.72
MDM2-229ENST00000543046 IFNA2P01563 188 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 CRYABP02511 175 aaKnown RBP4.32□□□□□ -1.72
MDM2-229ENST00000543046 FCGR2AP12318 317 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 TNNT1P13805 278 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 PPATQ06203 517 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 DDR1Q08345 913 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 GRIK3Q13003 919 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 CRYMQ14894 314 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 ODF3L2Q3SX64 289 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 CTXN3Q4LDR2 81 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 DNAJC21Q5F1R6 531 aaKnown RBP4.32□□□□□ -1.72
MDM2-229ENST00000543046 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.32□□□□□ -1.72
MDM2-229ENST00000543046 C2CD5Q86YS7 1000 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 ERC1Q8IUD2 1116 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 HERC6Q8IVU3 1022 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 FAM185AQ8N0U4 392 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 DPP10Q8N608 796 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 CMASQ8NFW8 434 aaPredicted RBP4.32□□□□□ -1.72
MDM2-229ENST00000543046 CEP70Q8NHQ1 597 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 NSMCE1Q8WV22 266 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 TCP11Q8WWU5 503 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 LPAR1Q92633 364 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 TRIM63Q969Q1 353 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 RBM17Q96I25 401 aaKnown RBP4.32□□□□□ -1.72
MDM2-229ENST00000543046 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.32□□□□□ -1.72
MDM2-229ENST00000543046 TMX4Q9H1E5 349 aaPredicted RBP4.32□□□□□ -1.72
MDM2-229ENST00000543046 ZSCAN16Q9H4T2 348 aaPredicted RBP4.32□□□□□ -1.72
MDM2-229ENST00000543046 ARGLU1Q9NWB6 273 aaPredicted RBP4.32□□□□□ -1.72
MDM2-229ENST00000543046 STK26Q9P289 416 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 UPB1Q9UBR1 384 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 PGAP2Q9UHJ9 254 aa4.32□□□□□ -1.72
MDM2-229ENST00000543046 LRRFIP2Q9Y608 721 aaKnown RBP4.32□□□□□ -1.72
MDM2-229ENST00000543046 TTC3P53804 2025 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 PTPRKQ15262 1439 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 USP47Q96K76 1375 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 EIF3CLB5ME19 914 aaKnown RBP4.31□□□□□ -1.72
MDM2-229ENST00000543046 H0YGN5 161 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 OAZ2O95190 189 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 SMC2O95347 1197 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 METTL18O95568 372 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 NTN1O95631 604 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 PNMA6AP0CW24 399 aaPredicted RBP4.31□□□□□ -1.72
MDM2-229ENST00000543046 MAGEA8P43361 318 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 CD151P48509 253 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 POLD2P49005 469 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 PAPOLAP51003 745 aaKnown RBP4.31□□□□□ -1.72
MDM2-229ENST00000543046 MVDP53602 400 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 EIF5P55010 431 aaKnown RBP4.31□□□□□ -1.72
MDM2-229ENST00000543046 RWDD2BP57060 319 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 LINC00205P59089 165 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 DAB2IPQ5VWQ8 1189 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 AADACL2Q6P093 401 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 DNAAF4Q8WXU2 420 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 INPP5DQ92835 1189 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 PPP1R10Q96QC0 940 aaKnown RBP4.31□□□□□ -1.72
MDM2-229ENST00000543046 FRG2BQ96QU4 278 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 TSPAN18Q96SJ8 248 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 NAP1L4Q99733 375 aaKnown RBP4.31□□□□□ -1.72
MDM2-229ENST00000543046 SH3GL3Q99963 347 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 IFT27Q9BW83 186 aa4.31□□□□□ -1.72
MDM2-229ENST00000543046 TLR8Q9NR97 1041 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms