RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 RRN3Q9NYV6 651 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 SMIM31A0A1B0GVY4 71 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 CCDC78A2IDD5 438 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 MBLAC1A4D2B0 266 aaPredicted RBP16.81■□□□□ 0.28
KDM2B-216ENST00000543025 AP1G2O75843 785 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 RTN3O95197 1032 aaPredicted RBP16.81■□□□□ 0.28
KDM2B-216ENST00000543025 F9P00740 461 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 AHSGP02765 367 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 XRCC1P18887 633 aaPredicted RBP16.81■□□□□ 0.28
KDM2B-216ENST00000543025 RABGGTBP53611 331 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 SH3BGRP55822 239 aaPredicted RBP16.81■□□□□ 0.28
KDM2B-216ENST00000543025 CENPLQ8N0S6 344 aaPredicted RBP16.81■□□□□ 0.28
KDM2B-216ENST00000543025 ARRDC4Q8NCT1 418 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 DNAJB3Q8WWF6 145 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 DPF3Q92784 378 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 CRTAC1Q9NQ79 661 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 XPR1Q9UBH6 696 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 RAB26Q9ULW5 256 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 ACOT9Q9Y305 439 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 HTTP42858 3142 aa16.81■□□□□ 0.28
KDM2B-216ENST00000543025 TARM1B6A8C7 271 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 USP17L7P0C7H9 530 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 ZNF865P0CJ78 1059 aaPredicted RBP16.8■□□□□ 0.28
KDM2B-216ENST00000543025 ENO3P13929 434 aaPredicted RBP16.8■□□□□ 0.28
KDM2B-216ENST00000543025 HOXD10P28358 340 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 ADGRE1Q14246 886 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 TLR1Q15399 786 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 TMEM198Q66K66 360 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 GPRIN1Q7Z2K8 1008 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 LSMEM2Q8N112 164 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 ZSCAN18Q8TBC5 510 aaPredicted RBP16.8■□□□□ 0.28
KDM2B-216ENST00000543025 PDCD6IPQ8WUM4 868 aaKnown RBP16.8■□□□□ 0.28
KDM2B-216ENST00000543025 DLG3Q92796 817 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 SMOQ99835 787 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 TKTL2Q9H0I9 626 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 WDR41Q9HAD4 459 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 EFCAB1Q9HAE3 211 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 NDUFA13Q9P0J0 144 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 AAR2Q9Y312 384 aaKnown RBP16.8■□□□□ 0.28
KDM2B-216ENST00000543025 CFLARO15519 480 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 LRIG2O94898 1065 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 GNRH1P01148 92 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 SRGAP2BP0DMP2 458 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 PGGT1BP53609 377 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 ART3Q13508 389 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 IRF5Q13568 498 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 RAB41Q5JT25 222 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 PCID2Q5JVF3 399 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 FAM35AQ86V20 835 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 SLC41A1Q8IVJ1 513 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 CNTN4Q8IWV2 1026 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 NAT14Q8WUY8 206 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 EPB41L1Q9H4G0 881 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 RIMS3Q9UJD0 308 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 CENPFP49454 3210 aa16.8■□□□□ 0.28
KDM2B-216ENST00000543025 DLX3O60479 287 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 DNAJA2O60884 412 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 F2P00734 622 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 JUNP05412 331 aaKnown RBP16.79■□□□□ 0.28
KDM2B-216ENST00000543025 ME2P23368 584 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 GABRB3P28472 473 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 POLD2P49005 469 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 RAB10P61026 200 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 CEACAM7Q14002 265 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 RFTN1Q14699 578 aaPredicted RBP16.79■□□□□ 0.28
KDM2B-216ENST00000543025 PDCD2Q16342 344 aaPredicted RBP16.79■□□□□ 0.28
KDM2B-216ENST00000543025 IQSEC1Q6DN90 963 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 PKN3Q6P5Z2 889 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 SATL1Q86VE3 508 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 KLHDC8BQ8IXV7 354 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 CNTD1Q8N815 330 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 SMG8Q8ND04 991 aaKnown RBP16.79■□□□□ 0.28
KDM2B-216ENST00000543025 BHLHE22Q8NFJ8 381 aaPredicted RBP16.79■□□□□ 0.28
KDM2B-216ENST00000543025 USP13Q92995 863 aaPredicted RBP16.79■□□□□ 0.28
KDM2B-216ENST00000543025 CELF6Q96J87 481 aaKnown RBP16.79■□□□□ 0.28
KDM2B-216ENST00000543025 SNX10Q9Y5X0 201 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 CACNG3O60359 315 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 ELNP15502 786 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 STMN1P16949 149 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 PMLP29590 882 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 PKNOX1P55347 436 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 ZNF33AQ06730 810 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 OTOP3Q7RTS5 596 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 ZMIZ2Q8NF64 920 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 ADCY4Q8NFM4 1077 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 PCED1BQ96HM7 432 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 SHROOM3Q8TF72 1996 aa16.79■□□□□ 0.28
KDM2B-216ENST00000543025 PTGESO14684 152 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 DPP6P42658 865 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 CXCR3P49682 368 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 COG7P83436 770 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 MS4A2Q01362 244 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 TRIM32Q13049 653 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 MFSD14CQ5VZR4 134 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 DCLRE1AQ6PJP8 1040 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 CTU1Q7Z7A3 348 aaKnown RBP16.78■□□□□ 0.28
KDM2B-216ENST00000543025 DENND6AQ8IWF6 608 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.78■□□□□ 0.28
KDM2B-216ENST00000543025 EDEM1Q92611 657 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 TBL1YQ9BQ87 522 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms