RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 HDAC3O15379 428 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 PSMD3O43242 534 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 USP12O75317 370 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 CELF2O95319 508 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 F9P00740 461 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 UBTFL6P0CB48 400 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 FAM200BP0CF97 657 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 THRAP10827 490 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 UQCRBP14927 111 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 NFKB1P19838 968 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 NCF2P19878 526 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 PIK3R1P27986 724 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 GABRB3P28472 473 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 EIF1AXP47813 144 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 CXCR3P49682 368 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 PAPOLAP51003 745 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 CLCN2P51788 898 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 EPHB1P54762 984 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 TPI1P60174 286 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 TBL3Q12788 808 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 ASPHQ12797 758 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 NME3Q13232 169 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 CUL3Q13618 768 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 LAPTM4AQ15012 233 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 ANO4Q32M45 955 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 CERCAMQ5T4B2 595 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 THEMIS2Q5TEJ8 643 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 LIPMQ5VYY2 423 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 WSCD1Q658N2 575 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 PM20D1Q6GTS8 502 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 SAPCD2Q86UD0 394 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 KCNMB4Q86W47 210 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 ZC3HC1Q86WB0 502 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 HPS6Q86YV9 775 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 TMEM126BQ8IUX1 230 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 CCDC117Q8IWD4 279 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 LSMEM2Q8N112 164 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 SCML4Q8N228 414 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 ARHGAP18Q8N392 663 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 ZMIZ2Q8NF64 920 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 RP9Q8TA86 221 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 SLC26A7Q8TE54 656 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 GDPD5Q8WTR4 605 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 AGAP3Q96P47 875 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 GPR78Q96P69 363 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 CITED4Q96RK1 184 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 TINF2Q9BSI4 451 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 ACE2Q9BYF1 805 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 PRKD2Q9BZL6 878 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 ILKAPQ9H0C8 392 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 ABHD16BQ9H3Z7 469 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 RHOJQ9H4E5 214 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 CAB39LQ9H9S4 337 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 TCF7L2Q9NQB0 619 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 CHRAC1Q9NRG0 131 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 C20orf96Q9NUD7 363 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 TMEM30AQ9NV96 361 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 C6orf203Q9P0P8 240 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 VTI1BQ9UEU0 232 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 STK39Q9UEW8 545 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 PIN4Q9Y237 131 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 GINS2Q9Y248 185 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 IPPQ9Y573 584 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 PTCH2Q9Y6C5 1203 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 SYNJ2BP-COX16A0A087WUM0 186 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 LOC100653049A0A140TA62 436 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 A0A1W2PRU2 124 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 E2F8A0AVK6 867 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 E9PBE3 544 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 SLCO1B7G3V0H7 640 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 PDHXO00330 501 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 GPR182O15218 404 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 DENRO43583 198 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 GFRA3O60609 400 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 KLHL41O60662 606 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 ZMPSTE24O75844 475 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 KRT34O76011 436 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 CHRNGP07510 517 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 PABPC4LP0CB38 370 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 SLC35E2BP0CK96 405 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 CD1EP15812 388 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 RAG1P15918 1043 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 VCLP18206 1134 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 TFEBP19484 476 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 IGFBP6P24592 240 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 PEX2P28328 305 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 NMBRP28336 390 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 HOXC8P31273 242 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 SERPINB6P35237 376 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 ABCG1P45844 678 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 GRIA4P48058 902 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 ERFP50548 548 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 RPL14P50914 215 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 CRYBB1P53674 252 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 AQP4P55087 323 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 MAP3K7CLP57077 242 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 SATB1Q01826 763 aa5.27□□□□□ -1.57
ATPAF1-212ENST00000542495 CDH17Q12864 832 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms