RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 AOPEPQ8N6M6 819 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 PDCD7Q8N8D1 485 aaKnown RBP15.9■□□□□ 0.14
VPS33A-206ENST00000542310 DENND6BQ8NEG7 585 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 ARHGEF26Q96DR7 871 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 VCPIP1Q96JH7 1222 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 MCEEQ96PE7 176 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 EPAS1Q99814 870 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 CNPY3Q9BT09 278 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 TM6SF2Q9BZW4 377 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 ZDHHC6Q9H6R6 413 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 HECAQ9UBI9 543 aaPredicted RBP15.9■□□□□ 0.14
VPS33A-206ENST00000542310 CA5BQ9Y2D0 317 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 HS3ST3A1Q9Y663 406 aa15.9■□□□□ 0.14
VPS33A-206ENST00000542310 FGF10O15520 208 aaPredicted RBP15.89■□□□□ 0.13
VPS33A-206ENST00000542310 TSPAN6O43657 245 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 KDELR3O43731 214 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 CKMT2P17540 419 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 ACP1P24666 158 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 EPHB2P29323 1055 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 DNA2P51530 1060 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 YBEYP58557 167 aaPredicted RBP15.89■□□□□ 0.13
VPS33A-206ENST00000542310 PROX2Q3B8N5 592 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 PARP15Q460N3 678 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 INO80DQ53TQ3 878 aaPredicted RBP15.89■□□□□ 0.13
VPS33A-206ENST00000542310 ZNF805Q5CZA5 627 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 SEL1L3Q68CR1 1132 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 ACAD10Q6JQN1 1059 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 MCOLN2Q8IZK6 566 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 OR13H1Q8NG92 308 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 ASB12Q8WXK4 309 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 FEM1CQ96JP0 617 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 GDAP1L1Q96MZ0 367 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 MYOCQ99972 504 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 SYT11Q9BT88 431 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 CATSPERBQ9H7T0 1116 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 FZD3Q9NPG1 666 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 DONSONQ9NYP3 566 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 FZD10Q9ULW2 581 aa15.89■□□□□ 0.13
VPS33A-206ENST00000542310 EIF3CLB5ME19 914 aaKnown RBP15.88■□□□□ 0.13
VPS33A-206ENST00000542310 TMCC1O94876 653 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 POP4O95707 220 aaKnown RBP15.88■□□□□ 0.13
VPS33A-206ENST00000542310 ATP1A3P13637 1013 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 DNAJC3Q13217 504 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 ZNF211Q13398 564 aaPredicted RBP15.88■□□□□ 0.13
VPS33A-206ENST00000542310 HS1BP3Q53T59 392 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 CCDC157Q569K6 752 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 PTAR1Q7Z6K3 402 aaPredicted RBP15.88■□□□□ 0.13
VPS33A-206ENST00000542310 SLC22A18ASQ8N1D0 253 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 CACTIN-AS1Q8N1I8 211 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 OR4C6Q8NH72 309 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 MDM1Q8TC05 714 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 RFFLQ8WZ73 363 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 BAP1Q92560 729 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 KLK6Q92876 244 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 NXPE2Q96DL1 559 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 LENG8Q96PV6 779 aaPredicted RBP15.88■□□□□ 0.13
VPS33A-206ENST00000542310 EIF3CQ99613 913 aaKnown RBP15.88■□□□□ 0.13
VPS33A-206ENST00000542310 CALN1Q9BXU9 219 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 SLC17A9Q9BYT1 436 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 GPSM3Q9Y4H4 160 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 ACTL7AQ9Y615 435 aa15.88■□□□□ 0.13
VPS33A-206ENST00000542310 C16orf96A6NNT2 1141 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 SMTNL1A8MU46 457 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 RIOK3O14730 519 aaKnown RBP15.87■□□□□ 0.13
VPS33A-206ENST00000542310 SDC3O75056 442 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 PIAS2O75928 621 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 IGSF6O95976 241 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 DGKAP23743 735 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 ABL2P42684 1182 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 RABIFP47224 123 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 RPL7AP62424 266 aaKnown RBP15.87■□□□□ 0.13
VPS33A-206ENST00000542310 RAD51Q06609 339 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 FGL2Q14314 439 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 DCUN1D2Q6PH85 259 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 IRF2BP2Q7Z5L9 587 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 UMODL1-AS1Q8N2C9 162 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 RYBPQ8N488 228 aaPredicted RBP15.87■□□□□ 0.13
VPS33A-206ENST00000542310 VOPP1Q96AW1 172 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 NOL6Q9H6R4 1146 aaKnown RBP15.87■□□□□ 0.13
VPS33A-206ENST00000542310 SCUBE2Q9NQ36 999 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 RTN4Q9NQC3 1192 aaKnown RBP15.87■□□□□ 0.13
VPS33A-206ENST00000542310 TMEM63CQ9P1W3 806 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 MFHAS1Q9Y4C4 1052 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 ANKRD36A6QL64 1941 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 LRRK1Q38SD2 2015 aa15.87■□□□□ 0.13
VPS33A-206ENST00000542310 DSPP15924 2871 aaKnown RBP15.86■□□□□ 0.13
VPS33A-206ENST00000542310 A0A1W2PQC6 194 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 FAM149AA5PLN7 773 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 TRABD2BA6NFA1 517 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 KRIT1O00522 736 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 BUB1O43683 1085 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 UGT2B4P06133 528 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 ALPPL2P10696 532 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 SUOXP51687 545 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 CLDN2P57739 230 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 HNRNPKP61978 463 aaKnown RBP eCLIP15.86■□□□□ 0.13
VPS33A-206ENST00000542310 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
VPS33A-206ENST00000542310 SERINC3Q13530 473 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 MYLK3Q32MK0 819 aa15.86■□□□□ 0.13
VPS33A-206ENST00000542310 ANO6Q4KMQ2 910 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms