RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 SLC35F5Q8WV83 523 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 ZNF570Q96NI8 536 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 TIMM22Q9Y584 194 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 TBKBP1A7MCY6 615 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 VAV1P15498 845 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 ALDH1A3P47895 512 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 SLC11A2P49281 568 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 TAS2R39P59534 338 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 RAB10P61026 200 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 KCNJ11Q14654 390 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 NFE2Q16621 373 aaPredicted RBP16.28■□□□□ 0.2
VARS2-212ENST00000542001 POM121L1PQ3SYA9 428 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 IRGCQ6NXR0 463 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 RNF180Q86T96 592 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 NIPA2Q8N8Q9 360 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 TBATAQ96M53 351 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 PDLIM7Q9NR12 457 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.28■□□□□ 0.2
VARS2-212ENST00000542001 CROTQ9UKG9 612 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 DAB1O75553 588 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 ESRRBO95718 433 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 ALDH2P05091 517 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 LINC00032P0C843 101 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 CRYBB1P53674 252 aaPredicted RBP16.28■□□□□ 0.2
VARS2-212ENST00000542001 RAD51Q06609 339 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 SLC9B1Q4ZJI4 515 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 PLEKHG4Q58EX7 1191 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 GPR158Q5T848 1215 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 RSPH1Q8WYR4 309 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 MRPL40Q9NQ50 206 aaKnown RBP16.28■□□□□ 0.2
VARS2-212ENST00000542001 CNGB3Q9NQW8 809 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 PCDHB5Q9Y5E4 795 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 NEK3P51956 506 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 RHOAP61586 193 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 TIGD5Q53EQ6 642 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 CCDC81Q6ZN84 652 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 CLEC20AQ6ZU45 233 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 ARCQ7LC44 396 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 PLD6Q8N2A8 252 aaKnown RBP16.28■□□□□ 0.2
VARS2-212ENST00000542001 BRI3BPQ8WY22 251 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 ZNF778Q96MU6 729 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 OR52B2Q96RD2 323 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 SCUBE2Q9NQ36 999 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 PPM1HQ9ULR3 514 aa16.28■□□□□ 0.2
VARS2-212ENST00000542001 FAM149AA5PLN7 773 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 KCNU1A8MYU2 1149 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 CCNT2O60583 730 aaKnown RBP16.27■□□□□ 0.2
VARS2-212ENST00000542001 TCEA3O75764 348 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 CTPS1P17812 591 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 ATP6V1B2P21281 511 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 SOX4Q06945 474 aaPredicted RBP16.27■□□□□ 0.2
VARS2-212ENST00000542001 LRRC74AQ0VAA2 488 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 TPGS1Q6ZTW0 290 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 FAM228AQ86W67 206 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 NPLOC4Q8TAT6 608 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 BCO2Q9BYV7 579 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 NENFQ9UMX5 172 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 A0A1B0GUL6 1792 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 GCATO75600 419 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 ATG7O95352 703 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 CCL23P55773 120 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 DUSP4Q13115 394 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 PTPRNQ16849 979 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 TEDDM1Q5T9Z0 273 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 GLT6D1Q7Z4J2 308 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 FSTL5Q8N475 847 aaPredicted RBP16.27■□□□□ 0.2
VARS2-212ENST00000542001 METTL6Q8TCB7 284 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 SIGLEC10Q96LC7 697 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 CDH19Q9H159 772 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 USP29Q9HBJ7 922 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 GLOD4Q9HC38 313 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 STARD7Q9NQZ5 370 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 SLC2A6Q9UGQ3 507 aa16.27■□□□□ 0.2
VARS2-212ENST00000542001 VPS26AO75436 327 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 STBD1O95210 358 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 HNRNPCP07910 306 aaKnown RBP eCLIP16.27■□□□□ 0.19
VARS2-212ENST00000542001 SPATA31D3P0C874 917 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 CYP3A5P20815 502 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 CDK7P50613 346 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 ZNF132P52740 706 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 PRKD1Q15139 912 aaPredicted RBP16.27■□□□□ 0.19
VARS2-212ENST00000542001 SPATA31D4Q6ZUB0 917 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 USP50Q70EL3 339 aaPredicted RBP16.27■□□□□ 0.19
VARS2-212ENST00000542001 CDYL2Q8N8U2 506 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 GANCQ8TET4 914 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 RNF145Q96MT1 663 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 SERPINB11Q96P15 392 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 HAUS8Q9BT25 410 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 BRD8Q9H0E9 1235 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 ABCC13Q9NSE7 274 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 WDR70Q9NW82 654 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 ZNHIT2Q9UHR6 403 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 STRCP1A6NGW2 1772 aa16.27■□□□□ 0.19
VARS2-212ENST00000542001 SYNCRIPO60506 623 aaKnown RBP16.26■□□□□ 0.19
VARS2-212ENST00000542001 TM7SF2O76062 418 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 AXLP30530 894 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 PTPN9P43378 593 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 FLT3LGP49771 235 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 IDH3AP50213 366 aa16.26■□□□□ 0.19
VARS2-212ENST00000542001 DAOAP59103 153 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms