RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 KLF6Q99612 283 aaPredicted RBP16.53■□□□□ 0.24
TRIM65-203ENST00000540812 STK33Q9BYT3 514 aa16.53■□□□□ 0.24
TRIM65-203ENST00000540812 NOCTQ9UK39 431 aaKnown RBP16.53■□□□□ 0.24
TRIM65-203ENST00000540812 ITM2BQ9Y287 266 aa16.53■□□□□ 0.24
TRIM65-203ENST00000540812 SHROOM3Q8TF72 1996 aa16.53■□□□□ 0.24
TRIM65-203ENST00000540812 IGLON5A6NGN9 336 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 SPINT1O43278 529 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 AP1G1O43747 822 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 CHRNB2P17787 502 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 ADRA1BP35368 520 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 KLK7P49862 253 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 HNRNPKP61978 463 aaKnown RBP eCLIP16.52■□□□□ 0.24
TRIM65-203ENST00000540812 FMO1Q01740 532 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 CCDC14Q49A88 953 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 RWDD4Q6NW29 188 aaKnown RBP16.52■□□□□ 0.24
TRIM65-203ENST00000540812 LEKR1Q6ZMV7 388 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 DCP2Q8IU60 420 aaKnown RBP16.52■□□□□ 0.24
TRIM65-203ENST00000540812 RYBPQ8N488 228 aaPredicted RBP16.52■□□□□ 0.24
TRIM65-203ENST00000540812 FAM181AQ8N9Y4 354 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 ZNF548Q8NEK5 533 aaPredicted RBP16.52■□□□□ 0.24
TRIM65-203ENST00000540812 JOSD2Q8TAC2 188 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 FAM174AQ8TBP5 190 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 GPT2Q8TD30 523 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 RXFP2Q8WXD0 754 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 ARHGEF2Q92974 986 aaKnown RBP16.52■□□□□ 0.24
TRIM65-203ENST00000540812 FCRL3Q96P31 734 aaPredicted RBP16.52■□□□□ 0.24
TRIM65-203ENST00000540812 OSBPL2Q9H1P3 480 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 GANQ9H2C0 597 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 TAB2Q9NYJ8 693 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 OR12D3Q9UGF7 316 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 DNAI1Q9UI46 699 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 NEU3Q9UQ49 428 aa16.52■□□□□ 0.24
TRIM65-203ENST00000540812 SPTY2D1-AS1A0A0U1RR47 76 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 C16orf96A6NNT2 1141 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 C1QL1O75973 258 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 GFPT2O94808 682 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 CSF2P04141 144 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 CYP1A1P04798 512 aaPredicted RBP16.51■□□□□ 0.23
TRIM65-203ENST00000540812 MPOP05164 745 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 NME1P15531 152 aaKnown RBP16.51■□□□□ 0.23
TRIM65-203ENST00000540812 RHOQP17081 205 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 RABIFP47224 123 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 NRG1Q02297 640 aaPredicted RBP16.51■□□□□ 0.23
TRIM65-203ENST00000540812 TLE3Q04726 772 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 TCP11X2Q5H9J9 407 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 PARGQ86W56 976 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 SPACA3Q8IXA5 215 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 IFI44Q8TCB0 444 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 ISG20Q96AZ6 181 aaKnown RBP16.51■□□□□ 0.23
TRIM65-203ENST00000540812 LENG8Q96PV6 779 aaPredicted RBP16.51■□□□□ 0.23
TRIM65-203ENST00000540812 C11orf70Q9BRQ4 267 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 DUSP23Q9BVJ7 150 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 C1QTNF2Q9BXJ5 285 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 CFAP46Q8IYW2 2715 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 ATMQ13315 3056 aa16.51■□□□□ 0.23
TRIM65-203ENST00000540812 NEMP2A6NFY4 417 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 C2CD4BA6NLJ0 364 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 EPHB6O15197 1021 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 CSO75390 466 aaKnown RBP16.5■□□□□ 0.23
TRIM65-203ENST00000540812 LRIG2O94898 1065 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 UGT2B4P06133 528 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 GP1BAP07359 652 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 MMP8P22894 467 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 SDC4P31431 198 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 MAPKAPK2P49137 400 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 CDR2Q01850 454 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 SGCGQ13326 291 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 PDE1CQ14123 709 aaPredicted RBP16.5■□□□□ 0.23
TRIM65-203ENST00000540812 ZNF805Q5CZA5 627 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 ZNF677Q86XU0 584 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 PLPP6Q8IY26 295 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 CCDC185Q8N715 623 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 NETO2Q8NC67 525 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 SLC30A5Q8TAD4 765 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 SLC39A7Q92504 469 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 NAF1Q96HR8 494 aaKnown RBP16.5■□□□□ 0.23
TRIM65-203ENST00000540812 DEPDC7Q96QD5 511 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 TMEM248Q9NWD8 314 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 IPO11Q9UI26 975 aaKnown RBP16.5■□□□□ 0.23
TRIM65-203ENST00000540812 DACH1Q9UI36 760 aa16.5■□□□□ 0.23
TRIM65-203ENST00000540812 CHD5Q8TDI0 1954 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 KRIT1O00522 736 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 NEMP1O14524 444 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 FPGTO14772 594 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 ATXN7O15265 892 aaPredicted RBP16.49■□□□□ 0.23
TRIM65-203ENST00000540812 TSPAN6O43657 245 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 USP12O75317 370 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 GSRP00390 522 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 PLEKP08567 350 aaPredicted RBP16.49■□□□□ 0.23
TRIM65-203ENST00000540812 JUNDP17535 347 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 EEF1GP26641 437 aaKnown RBP16.49■□□□□ 0.23
TRIM65-203ENST00000540812 DUSP3P51452 185 aaPredicted RBP16.49■□□□□ 0.23
TRIM65-203ENST00000540812 HDAC4P56524 1084 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 GABREP78334 506 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 EIF2B5Q13144 721 aaKnown RBP16.49■□□□□ 0.23
TRIM65-203ENST00000540812 CDKN3Q16667 212 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 DEFB133Q30KQ1 61 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 ARL13BQ3SXY8 428 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 LRRC73Q5JTD7 316 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 ATXN7L2Q5T6C5 722 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms