RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 SULT2A1Q06520 285 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 NOMO1Q15155 1222 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 CYTH1Q15438 398 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 FNDC3BQ53EP0 1204 aaKnown RBP16.99■□□□□ 0.31
UBC-208ENST00000540700 SEL1L2Q5TEA6 688 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 PAPD7Q5XG87 772 aaKnown RBP16.99■□□□□ 0.31
UBC-208ENST00000540700 SYT10Q6XYQ8 523 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 ADAT2Q7Z6V5 191 aaKnown RBP16.99■□□□□ 0.31
UBC-208ENST00000540700 CHPFQ8IZ52 775 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 RASGEF1CQ8N431 466 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 ATPAF2Q8N5M1 289 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 ACTL9Q8TC94 416 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 KCNV2Q8TDN2 545 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 UCMAQ8WVF2 138 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 UBE2Q2Q8WVN8 375 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 GATA6Q92908 595 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 HDAC11Q96DB2 347 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 C16orf45Q96MC5 204 aaPredicted RBP16.99■□□□□ 0.31
UBC-208ENST00000540700 PRDM16Q9HAZ2 1276 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 TMEM9BQ9NQ34 198 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 MMP17Q9ULZ9 603 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 ITPR1Q14643 2758 aa16.99■□□□□ 0.31
UBC-208ENST00000540700 NUP205Q92621 2012 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 TMEM8BA6NDV4 472 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 PATE3B3GLJ2 98 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 APOC4-APOC2K7ER74 178 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 MUSKO15146 869 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 CEP104O60308 925 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 GJB3O75712 270 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 TMCC1O94876 653 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 APOC2P02655 101 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 NTSR1P30989 418 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 RGRP47804 291 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 IL10RBQ08334 325 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 DLG2Q15700 870 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 NUDT18Q6ZVK8 323 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 ATP11CQ8NB49 1132 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 DEFB124Q8NES8 71 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 PTPRN2Q92932 1015 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 NSMCE3Q96MG7 304 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 NAPGQ99747 312 aaPredicted RBP16.98■□□□□ 0.31
UBC-208ENST00000540700 TPSD1Q9BZJ3 242 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 TNKS2Q9H2K2 1166 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 SP110Q9HB58 689 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 SLC25A13Q9UJS0 675 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 PLA2G4CQ9UP65 541 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 LHX6Q9UPM6 363 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 CACNA1EQ15878 2313 aa16.98■□□□□ 0.31
UBC-208ENST00000540700 SIN3BO75182 1162 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 TJP3O95049 919 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 CEACAM1P13688 526 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 PPIDQ08752 370 aaKnown RBP16.97■□□□□ 0.31
UBC-208ENST00000540700 SLC10A7Q0GE19 358 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 PRKD1Q15139 912 aaPredicted RBP16.97■□□□□ 0.31
UBC-208ENST00000540700 HNRNPA1L2Q32P51 320 aaKnown RBP16.97■□□□□ 0.31
UBC-208ENST00000540700 C9orf64Q5T6V5 341 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 RETSATQ6NUM9 610 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 C22orf39Q6P5X5 142 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 SERPINA13PQ6UXR4 307 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 Q6ZVU0 165 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 SYT13Q7L8C5 426 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 CYP2U1Q7Z449 544 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 ZC3H18Q86VM9 953 aaKnown RBP16.97■□□□□ 0.31
UBC-208ENST00000540700 PGBD5Q8N414 524 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 KDM1BQ8NB78 822 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 ATG4AQ8WYN0 398 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 MAML1Q92585 1016 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 TSGA13Q96PP4 275 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 SLC6A17Q9H1V8 727 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 LHX3Q9UBR4 397 aa16.97■□□□□ 0.31
UBC-208ENST00000540700 UBA2Q9UBT2 640 aaPredicted RBP16.97■□□□□ 0.31
UBC-208ENST00000540700 CDX4O14627 284 aaPredicted RBP16.96■□□□□ 0.31
UBC-208ENST00000540700 HYAL3O43820 417 aaPredicted RBP16.96■□□□□ 0.31
UBC-208ENST00000540700 FGGP02679 453 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 HOXB2P14652 356 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 CSRP1P21291 193 aaKnown RBP16.96■□□□□ 0.31
UBC-208ENST00000540700 MSNP26038 577 aaKnown RBP16.96■□□□□ 0.31
UBC-208ENST00000540700 NR2C2P49116 596 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 COPAP53621 1224 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 ZBTB17Q13105 803 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 KCTD19Q17RG1 926 aaPredicted RBP16.96■□□□□ 0.31
UBC-208ENST00000540700 ZSCAN30Q86W11 494 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 CCDC13Q8IYE1 715 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 TEX26Q8N6G2 289 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 CHST14Q8NCH0 376 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 TSTD1Q8NFU3 115 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 P3H4Q92791 437 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 PBKQ96KB5 322 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 EXOC2Q96KP1 924 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 QKIQ96PU8 341 aaKnown RBP eCLIP16.96■□□□□ 0.31
UBC-208ENST00000540700 CEP41Q9BYV8 373 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 TM6SF2Q9BZW4 377 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 PRSS16Q9NQE7 514 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 EBF1Q9UH73 591 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 HPCAL4Q9UM19 191 aa16.96■□□□□ 0.31
UBC-208ENST00000540700 CXorf51AA0A1B0GTR3 108 aa16.95■□□□□ 0.3
UBC-208ENST00000540700 TTC24A2A3L6 582 aaPredicted RBP16.95■□□□□ 0.3
UBC-208ENST00000540700 CTAGE9A4FU28 777 aa16.95■□□□□ 0.3
UBC-208ENST00000540700 ZSCAN5CA6NGD5 496 aaPredicted RBP16.95■□□□□ 0.3
UBC-208ENST00000540700 KCNK1O00180 336 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms