RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 MID2Q9UJV3 735 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 FNDC1Q4ZHG4 1894 aaPredicted RBP25.21■■□□□ 1.63
RAB40C-204ENST00000538492 PIGNO95427 931 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 HTR7P34969 479 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 RAB10P61026 200 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 MAXP61244 160 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 CUL3Q13618 768 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 RANBP10Q6VN20 620 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 RTN4RL1Q86UN2 441 aaPredicted RBP25.21■■□□□ 1.63
RAB40C-204ENST00000538492 MYLK4Q86YV6 388 aaPredicted RBP25.21■■□□□ 1.63
RAB40C-204ENST00000538492 NXNL1Q96CM4 212 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 ELMO2Q96JJ3 720 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 OMDQ99983 421 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 OSBPL1AQ9BXW6 950 aa25.21■■□□□ 1.63
RAB40C-204ENST00000538492 G3BP2Q9UN86 482 aaKnown RBP25.21■■□□□ 1.63
RAB40C-204ENST00000538492 ARHGEF37A1IGU5 675 aa25.2■■□□□ 1.63
RAB40C-204ENST00000538492 ANPEPP15144 967 aa25.2■■□□□ 1.63
RAB40C-204ENST00000538492 CD1EP15812 388 aa25.2■■□□□ 1.63
RAB40C-204ENST00000538492 STMN1P16949 149 aa25.2■■□□□ 1.63
RAB40C-204ENST00000538492 OR1G1P47890 313 aa25.2■■□□□ 1.63
RAB40C-204ENST00000538492 USP46P62068 366 aa25.2■■□□□ 1.63
RAB40C-204ENST00000538492 AFMIDQ63HM1 303 aa25.2■■□□□ 1.63
RAB40C-204ENST00000538492 LRRC8EQ6NSJ5 796 aa25.2■■□□□ 1.63
RAB40C-204ENST00000538492 GLB1LQ6UWU2 654 aa25.2■■□□□ 1.63
RAB40C-204ENST00000538492 EFCAB3Q8N7B9 438 aa25.2■■□□□ 1.63
RAB40C-204ENST00000538492 CCDC124Q96CT7 223 aaKnown RBP25.2■■□□□ 1.63
RAB40C-204ENST00000538492 DRC3Q9H069 523 aa25.2■■□□□ 1.63
RAB40C-204ENST00000538492 AURKAO14965 403 aa25.2■■□□□ 1.62
RAB40C-204ENST00000538492 SKIP12755 728 aa25.2■■□□□ 1.62
RAB40C-204ENST00000538492 ELNP15502 786 aa25.2■■□□□ 1.62
RAB40C-204ENST00000538492 EPHA3P29320 983 aa25.2■■□□□ 1.62
RAB40C-204ENST00000538492 NUMBP49757 651 aa25.2■■□□□ 1.62
RAB40C-204ENST00000538492 WNT3AP56704 352 aa25.2■■□□□ 1.62
RAB40C-204ENST00000538492 ITKQ08881 620 aa25.2■■□□□ 1.62
RAB40C-204ENST00000538492 DLG1Q12959 904 aa25.2■■□□□ 1.62
RAB40C-204ENST00000538492 FSCBQ5H9T9 825 aa25.2■■□□□ 1.62
RAB40C-204ENST00000538492 PNPLA1Q8N8W4 532 aa25.2■■□□□ 1.62
RAB40C-204ENST00000538492 RDH11Q8TC12 318 aa25.2■■□□□ 1.62
RAB40C-204ENST00000538492 STYXQ8WUJ0 223 aa25.2■■□□□ 1.62
RAB40C-204ENST00000538492 RAP2CQ9Y3L5 183 aa25.2■■□□□ 1.62
RAB40C-204ENST00000538492 CABYRO75952 493 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 BAG2O95816 211 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 SERPINB5P36952 375 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 KLF10Q13118 480 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 CCSAPQ6IQ19 270 aaPredicted RBP25.19■■□□□ 1.62
RAB40C-204ENST00000538492 TMC7Q7Z402 723 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 DEFB107AQ8IZN7 70 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 PPFIBP2Q8ND30 876 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 KLHDC9Q8NEP7 349 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 KLHL5Q96PQ7 755 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 TREX1Q9NSU2 369 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 ANGPTL2Q9UKU9 493 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 PPM1HQ9ULR3 514 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 MIA3Q5JRA6 1907 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 J3KR12 359 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 MATN2O00339 956 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 COX4I1P13073 169 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 RPL14P50914 215 aaKnown RBP25.19■■□□□ 1.62
RAB40C-204ENST00000538492 TRIM71Q2Q1W2 868 aaKnown RBP25.19■■□□□ 1.62
RAB40C-204ENST00000538492 CMPK2Q5EBM0 449 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 CLLU1OSQ5K130 101 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 ZNF280DQ6N043 979 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 LMNTD2Q8IXW0 634 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 SGF29Q96ES7 293 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 NUF2Q9BZD4 464 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 NT5MQ9NPB1 228 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 DNAJB4Q9UDY4 337 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 ZDHHC2Q9UIJ5 367 aa25.19■■□□□ 1.62
RAB40C-204ENST00000538492 TTC24A2A3L6 582 aaPredicted RBP25.18■■□□□ 1.62
RAB40C-204ENST00000538492 DLX3O60479 287 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 TBX18O95935 607 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 PRKAR2AP13861 404 aaKnown RBP25.18■■□□□ 1.62
RAB40C-204ENST00000538492 ITGAXP20702 1163 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 TAS2R39P59534 338 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 AP2B1P63010 937 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 MON1AQ86VX9 555 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 ZNF354CQ86Y25 554 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 KBTBD2Q8IY47 623 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 NUP93Q8N1F7 819 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 TTC9BQ8N6N2 239 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 PABPC5Q96DU9 382 aaKnown RBP25.18■■□□□ 1.62
RAB40C-204ENST00000538492 UBE2OQ9C0C9 1292 aaKnown RBP25.18■■□□□ 1.62
RAB40C-204ENST00000538492 ZCWPW1Q9H0M4 648 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 GMIPQ9P107 970 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 TLR6Q9Y2C9 796 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 CNTN5O94779 1100 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 PAX3P23760 479 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 NKX3-2P78367 333 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 EFEMP1Q12805 493 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 SEL1L3Q68CR1 1132 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 HMCESQ96FZ2 354 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 CDH22Q9UJ99 828 aa25.18■■□□□ 1.62
RAB40C-204ENST00000538492 TARM1B6A8C7 271 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 MAP3K7O43318 606 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 HAPLN1P10915 354 aaPredicted RBP25.17■■□□□ 1.62
RAB40C-204ENST00000538492 PAMP19021 973 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 TFEBP19484 476 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 CAP1Q01518 475 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 SLC10A7Q0GE19 358 aa25.17■■□□□ 1.62
RAB40C-204ENST00000538492 ALFQ53S48 1182 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms