RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 SPATA31D3P0C874 917 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 CSF2RAP15509 400 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 ARNTP27540 789 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 MPP1Q00013 466 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 SERINC3Q13530 473 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 GRM3Q14832 879 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 HECTD3Q5T447 861 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 KYAT3Q6YP21 454 aaKnown RBP17.68■□□□□ 0.42
SNX17-210ENST00000537606 SPATA31D4Q6ZUB0 917 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 OR7D4Q8NG98 312 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 PPP1R14CQ8TAE6 165 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 AGAP11Q8TF27 550 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 WBP2Q969T9 261 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 TBC1D10AQ9BXI6 508 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 FNIP2Q9P278 1114 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 TCAF1Q9Y4C2 921 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 MYLKQ15746 1914 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 A0A096LPK6 155 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 AHSGP02765 367 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 ACRP10323 421 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 AVPR1AP37288 418 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 HARS2P49590 506 aaKnown RBP17.68■□□□□ 0.42
SNX17-210ENST00000537606 ATG16L1Q676U5 607 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 PDPK2PQ6A1A2 396 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 NSMCE1Q8WV22 266 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 SKA1Q96BD8 255 aa17.68■□□□□ 0.42
SNX17-210ENST00000537606 MUSKO15146 869 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 ITM2AO43736 263 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 TSPAN3O60637 253 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 HAUS5O94927 633 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 SERPINB8P50452 374 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 SGSHP51688 502 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 BTG3Q14201 252 aaPredicted RBP17.67■□□□□ 0.42
SNX17-210ENST00000537606 FRG1Q14331 258 aaKnown RBP17.67■□□□□ 0.42
SNX17-210ENST00000537606 ATG14Q6ZNE5 492 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 C10orf107Q8IVU9 208 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 ZNF558Q96NG5 402 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 NMUR2Q9GZQ4 415 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 SMPD4Q9NXE4 827 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 DONSONQ9NYP3 566 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 UXTQ9UBK9 157 aaPredicted RBP17.67■□□□□ 0.42
SNX17-210ENST00000537606 HBS1LQ9Y450 684 aaKnown RBP17.67■□□□□ 0.42
SNX17-210ENST00000537606 CCL22O00626 93 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 ATP5HO75947 161 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 ABLIM3O94929 683 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 C2P06681 752 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 ALDH1A3P47895 512 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 ARCN1P48444 511 aaKnown RBP17.67■□□□□ 0.42
SNX17-210ENST00000537606 KPNA1P52294 538 aaPredicted RBP17.67■□□□□ 0.42
SNX17-210ENST00000537606 STX3Q13277 289 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 LBRQ14739 615 aaKnown RBP17.67■□□□□ 0.42
SNX17-210ENST00000537606 POTEHQ6S545 545 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 LONP2Q86WA8 852 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 C7orf26Q96N11 449 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 CYP2S1Q96SQ9 504 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 SPON2Q9BUD6 331 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 CRISPLD2Q9H0B8 497 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 YIPF1Q9Y548 306 aa17.67■□□□□ 0.42
SNX17-210ENST00000537606 PHGDHO43175 533 aaKnown RBP17.66■□□□□ 0.42
SNX17-210ENST00000537606 PROCP04070 461 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 CLTBP09497 229 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 GLDCP23378 1020 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 CA8P35219 290 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 AQP5P55064 265 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 IL10RBQ08334 325 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 RIPK1Q13546 671 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 PCLAFQ15004 111 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 PARP15Q460N3 678 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 RAPH1Q70E73 1250 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 ZC3HC1Q86WB0 502 aaKnown RBP17.66■□□□□ 0.42
SNX17-210ENST00000537606 TRIM42Q8IWZ5 723 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 SLC39A11Q8N1S5 342 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 ARRDC2Q8TBH0 407 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 PAWRQ96IZ0 340 aaKnown RBP17.66■□□□□ 0.42
SNX17-210ENST00000537606 MIPEPQ99797 713 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 SEMA3CQ99985 751 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 MCMBPQ9BTE3 642 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 TRPM5Q9NZQ8 1165 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.66■□□□□ 0.42
SNX17-210ENST00000537606 COL4A6Q14031 1691 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 FCHO1O14526 889 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 PRRG1O14668 218 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 BIRC5O15392 142 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 SNNO75324 88 aaPredicted RBP17.66■□□□□ 0.42
SNX17-210ENST00000537606 FGF3P11487 239 aaPredicted RBP17.66■□□□□ 0.42
SNX17-210ENST00000537606 CORO1AP31146 461 aaKnown RBP17.66■□□□□ 0.42
SNX17-210ENST00000537606 DSG1Q02413 1049 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 TWF1Q12792 350 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 ZNF460Q14592 562 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 LRRC26Q2I0M4 334 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 MBLAC2Q68D91 279 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 IL31Q6EBC2 164 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 TEX26Q8N6G2 289 aa17.66■□□□□ 0.42
SNX17-210ENST00000537606 ZNF689Q96CS4 500 aaPredicted RBP17.66■□□□□ 0.42
SNX17-210ENST00000537606 PRICKLE1Q96MT3 831 aaPredicted RBP17.66■□□□□ 0.42
SNX17-210ENST00000537606 TIMM44O43615 452 aa17.65■□□□□ 0.42
SNX17-210ENST00000537606 DNAJC6O75061 913 aa17.65■□□□□ 0.42
SNX17-210ENST00000537606 STC2O76061 302 aa17.65■□□□□ 0.42
SNX17-210ENST00000537606 CSPG5O95196 566 aa17.65■□□□□ 0.42
SNX17-210ENST00000537606 IL1BP01584 269 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms