RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 PAAF1Q9BRP4 392 aa16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 C6orf203Q9P0P8 240 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-202ENST00000535997 FNDC1Q4ZHG4 1894 aaPredicted RBP16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 FAM95CA0A1B0GW59 222 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 GLTPD2A6NH11 291 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 RNASEH1O60930 286 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 PIM1P11309 404 aaPredicted RBP16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 PAMP19021 973 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 AVPR1AP37288 418 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 SCNN1GP51170 649 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 HERC3Q15034 1050 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 TRIP10Q15642 601 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 FOXB2Q5VYV0 432 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 SLC30A9Q6PML9 568 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 AGMOQ6ZNB7 445 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 CEP97Q8IW35 865 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 NXNL1Q96CM4 212 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 BTBD9Q96Q07 612 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 MRPL57Q9BQC6 102 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 FTHL17Q9BXU8 183 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 MRPL46Q9H2W6 279 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 ABCC13Q9NSE7 274 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 NCKIPSDQ9NZQ3 722 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 XPR1Q9UBH6 696 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 PSMD13Q9UNM6 376 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 TCAF1Q9Y4C2 921 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 TRPV2Q9Y5S1 764 aa16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 COL4A4P53420 1690 aaPredicted RBP16.23■□□□□ 0.19
CHMP1A-202ENST00000535997 MAP3K13O43283 966 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 NPHS1O60500 1241 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 TADA2AO75478 443 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 CYP11A1P05108 521 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 ARNTP27540 789 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 PEX2P28328 305 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 CCR1P32246 355 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 CCR10P46092 362 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 ARMC3Q5W041 872 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 TIGD7Q6NT04 549 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 RANBP10Q6VN20 620 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 MRPL10Q7Z7H8 261 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 LRRC49Q8IUZ0 686 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 CDRT15Q96T59 188 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 FICDQ9BVA6 458 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 SLC39A8Q9C0K1 460 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 EFCAB1Q9HAE3 211 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 ZBTB26Q9HCK0 441 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 TREX1Q9NSU2 369 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 CPA4Q9UI42 421 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 CLEC11AQ9Y240 323 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 IRAK2O43187 625 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 PAGE1O75459 146 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 PGK1P00558 417 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 CD1EP15812 388 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 PAPOLAP51003 745 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 KPNA2P52292 529 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 PGGT1BP53609 377 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 MPP1Q00013 466 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 NSUN2Q08J23 767 aaKnown RBP eCLIP16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 MSLNQ13421 630 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 MAPRE1Q15691 268 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 CNGA3Q16281 694 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 PIGGQ5H8A4 983 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 MANEALQ5VSG8 457 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 BNC2Q6ZN30 1099 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 PIWIL4Q7Z3Z4 852 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 SDCCAG8Q86SQ7 713 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 TMEM126BQ8IUX1 230 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 ARHGAP18Q8N392 663 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 KDM1BQ8NB78 822 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 C2CD4AQ8NCU7 369 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 SPDYE1Q8NFV5 336 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 PIP4K2CQ8TBX8 421 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 ZNF419Q96HQ0 510 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 PPP1R36Q96LQ0 422 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 PRKD2Q9BZL6 878 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 SPON1Q9HCB6 807 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 ACSS2Q9NR19 701 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 DSEQ9UL01 958 aa16.22■□□□□ 0.19
CHMP1A-202ENST00000535997 A0A087X1B8 175 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 TRPC5OSA6NMA1 111 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 B3GAT3O94766 335 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 CD151P48509 253 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 AQP4P55087 323 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 DNAJB13P59910 316 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 POU4F1Q01851 419 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 CCL14Q16627 93 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 PPM1LQ5SGD2 360 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 OGFRL1Q5TC84 451 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 ZFP1Q6P2D0 407 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 KIAA0408Q6ZU52 694 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 MFSD6LQ8IWD5 586 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 PGAM4Q8N0Y7 254 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 PQLC1Q8N2U9 271 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 ICA1LQ8NDH6 482 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 FCRL2Q96LA5 508 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 PKMYT1Q99640 499 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 FSD1LQ9BXM9 530 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 MRGBPQ9NV56 204 aa16.21■□□□□ 0.19
CHMP1A-202ENST00000535997 RBM22Q9NW64 420 aaKnown RBP eCLIP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms