RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 MPHOSPH6Q99547 160 aaKnown RBP3.82□□□□□ -1.8
USP48-215ENST00000534705 MAF1Q9H063 256 aa3.82□□□□□ -1.8
USP48-215ENST00000534705 MAGEH1Q9H213 219 aa3.82□□□□□ -1.8
USP48-215ENST00000534705 ELAC1Q9H777 363 aaKnown RBP3.82□□□□□ -1.8
USP48-215ENST00000534705 SPAG4Q9NPE6 437 aa3.82□□□□□ -1.8
USP48-215ENST00000534705 LRFN1Q9P244 771 aa3.82□□□□□ -1.8
USP48-215ENST00000534705 LAMP3Q9UQV4 416 aa3.82□□□□□ -1.8
USP48-215ENST00000534705 DTX4Q9Y2E6 619 aa3.82□□□□□ -1.8
USP48-215ENST00000534705 PKP3Q9Y446 797 aa3.82□□□□□ -1.8
USP48-215ENST00000534705 TJP1Q07157 1748 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 KIF24Q5T7B8 1368 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 CCDC7Q96M83 1385 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 GAGE12JA6NER3 117 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 CD8B2A6NJW9 211 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 FOXO6A8MYZ6 492 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 HEXIM1O94992 359 aaKnown RBP3.81□□□□□ -1.8
USP48-215ENST00000534705 LDHAP00338 332 aaKnown RBP3.81□□□□□ -1.8
USP48-215ENST00000534705 CST5P28325 142 aaPredicted RBP3.81□□□□□ -1.8
USP48-215ENST00000534705 SERPINA4P29622 427 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 HOXC9P31274 260 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 OAZ1P54368 228 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 IRX6P78412 446 aaPredicted RBP3.81□□□□□ -1.8
USP48-215ENST00000534705 CHAF1AQ13111 956 aaPredicted RBP3.81□□□□□ -1.8
USP48-215ENST00000534705 DCTN1Q14203 1278 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 DHX8Q14562 1220 aaKnown RBP3.81□□□□□ -1.8
USP48-215ENST00000534705 SMTNL2Q2TAL5 461 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 GALNTL6Q49A17 601 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 CCDC38Q502W7 563 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 MANEAQ5SRI9 462 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 C6orf10Q5SRN2 563 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 SULT6B1Q6IMI4 303 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 COLCA1Q6ZS62 124 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 RFX8Q6ZV50 586 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 TRAPPC11Q7Z392 1133 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 KDELC2Q7Z4H8 507 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 CCDC117Q8IWD4 279 aaPredicted RBP3.81□□□□□ -1.8
USP48-215ENST00000534705 TCP11L2Q8N4U5 519 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 PPM1EQ8WY54 764 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 IP6K1Q92551 441 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 CENPIQ92674 756 aaPredicted RBP3.81□□□□□ -1.8
USP48-215ENST00000534705 SDCCAG3Q96C92 435 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 PIGSQ96S52 555 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 SORBS1Q9BX66 1292 aaKnown RBP3.81□□□□□ -1.8
USP48-215ENST00000534705 OSBPL5Q9H0X9 879 aaPredicted RBP3.81□□□□□ -1.8
USP48-215ENST00000534705 ABHD16BQ9H3Z7 469 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 IL21RQ9HBE5 538 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 FZD3Q9NPG1 666 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 SLC22A11Q9NSA0 550 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 RNF146Q9NTX7 359 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 PRDM4Q9UKN5 801 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 TNFSF13BQ9Y275 285 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 BRCA1P38398 1863 aaKnown RBP3.81□□□□□ -1.8
USP48-215ENST00000534705 KIF13BQ9NQT8 1826 aa3.81□□□□□ -1.8
USP48-215ENST00000534705 SRCAPQ6ZRS2 3230 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 TTC3P53804 2025 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 OVOS2A0A0G2JMS6 1433 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 INSRP06213 1382 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 FLT4P35916 1363 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 CCDC88AQ3V6T2 1871 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 AFDNP55196 1824 aaKnown RBP3.8□□□□□ -1.8
USP48-215ENST00000534705 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.8□□□□□ -1.8
USP48-215ENST00000534705 B4DGG1 531 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 IFRD1O00458 451 aaPredicted RBP3.8□□□□□ -1.8
USP48-215ENST00000534705 MDM4O15151 490 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 MSI1O43347 362 aaKnown RBP3.8□□□□□ -1.8
USP48-215ENST00000534705 ZC3H11AO75152 810 aaKnown RBP eCLIP3.8□□□□□ -1.8
USP48-215ENST00000534705 NEURL1O76050 574 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 IFNA2P01563 188 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 GYS1P13807 737 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 VEGFAP15692 232 aaPredicted RBP3.8□□□□□ -1.8
USP48-215ENST00000534705 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 RHAGQ02094 409 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 RNASELQ05823 741 aaKnown RBP3.8□□□□□ -1.8
USP48-215ENST00000534705 POU5F1BQ06416 359 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 RRS1Q15050 365 aaKnown RBP3.8□□□□□ -1.8
USP48-215ENST00000534705 PDCD2Q16342 344 aaPredicted RBP3.8□□□□□ -1.8
USP48-215ENST00000534705 C9orf47Q6ZRZ4 202 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 ANKS1BQ7Z6G8 1248 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 DEFB132Q7Z7B7 95 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 KLBQ86Z14 1044 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 PTGR2Q8N8N7 351 aaPredicted RBP3.8□□□□□ -1.8
USP48-215ENST00000534705 CLEC4CQ8WTT0 213 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 COG3Q96JB2 828 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 FAM234AQ9H0X4 552 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 PDE11AQ9HCR9 933 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 G6PC2Q9NQR9 355 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.8□□□□□ -1.8
USP48-215ENST00000534705 UTS2RQ9UKP6 389 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 PROCRQ9UNN8 238 aa3.8□□□□□ -1.8
USP48-215ENST00000534705 LAS1LQ9Y4W2 734 aaKnown RBP3.8□□□□□ -1.8
USP48-215ENST00000534705 CACNA1SQ13698 1873 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 KDM3BQ7LBC6 1761 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 NSD2O96028 1365 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 KIAA1551Q9HCM1 1747 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 CCDC189A1A4V9 331 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 TMEM247A6NEH6 219 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 AGAP5A6NIR3 686 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 NDUFB8O95169 186 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 NFATC1O95644 943 aa3.79□□□□□ -1.8
USP48-215ENST00000534705 SYF2O95926 243 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms