RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 CCDC185Q8N715 623 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 TSC1Q92574 1164 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 IFT43Q96FT9 208 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 MYOCQ99972 504 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 CALN1Q9BXU9 219 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 TM6SF2Q9BZW4 377 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 ZDHHC6Q9H6R6 413 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 DONSONQ9NYP3 566 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 ZFR2Q9UPR6 939 aaKnown RBP12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 FADS3Q9Y5Q0 445 aa12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 TP53BP1Q12888 1972 aaPredicted RBP12.63□□□□□ -0.39
CAPRIN1-213ENST00000533562 NEMP2A6NFY4 417 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 C16orf96A6NNT2 1141 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 KRIT1O00522 736 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 NEMP1O14524 444 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 TSPAN6O43657 245 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 BUB1O43683 1085 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 KDELR3O43731 214 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 SDC3O75056 442 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 PAK4O96013 591 aaPredicted RBP12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 GSRP00390 522 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 FERP16591 822 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 DGKAP23743 735 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 EPHB2P29323 1055 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 ACADVLP49748 655 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 YBEYP58557 167 aaPredicted RBP12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 RAD51Q06609 339 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 CYP4F3Q08477 520 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 CAMK2BQ13554 666 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 NCAPHQ15003 741 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 MYLK3Q32MK0 819 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 ZNF805Q5CZA5 627 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 SEL1L3Q68CR1 1132 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 ACAD10Q6JQN1 1059 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 DCUN1D2Q6PH85 259 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 Q6ZSR6 202 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 MON1BQ7L1V2 547 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 KANSL1Q7Z3B3 1105 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 ABI3BPQ7Z7G0 1075 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 MARCH9Q86YJ5 346 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 SLC25A45Q8N413 288 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 OR2AP1Q8NGE2 309 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 CASKIN2Q8WXE0 1202 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 ARHGEF26Q96DR7 871 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 EPAS1Q99814 870 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 CNPY3Q9BT09 278 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 OSBPL1AQ9BXW6 950 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 MAGEB5Q9BZ81 275 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 CATSPERBQ9H7T0 1116 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 FZD3Q9NPG1 666 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 RALYQ9UKM9 306 aaKnown RBP12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 ACTL7AQ9Y615 435 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 ASXL3Q9C0F0 2248 aa12.62□□□□□ -0.39
CAPRIN1-213ENST00000533562 A6NNZ2 444 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 SMTNL1A8MU46 457 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 SIGLEC6O43699 453 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 ALPPL2P10696 532 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 TNFAIP3P21580 790 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 ACP1P24666 158 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 CLDN2P57739 230 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 E2F1Q01094 437 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 INO80DQ53TQ3 878 aaPredicted RBP12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 GCNT7Q6ZNI0 430 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 PARS2Q7L3T8 475 aaKnown RBP12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 APTXQ7Z2E3 356 aaKnown RBP12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 MCOLN2Q8IZK6 566 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 RTL3Q8N8U3 475 aaKnown RBP12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 OR13H1Q8NG92 308 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 OR6K2Q8NGY2 324 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 VCPIP1Q96JH7 1222 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 MCEEQ96PE7 176 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 LENG8Q96PV6 779 aaPredicted RBP12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 HSD3B7Q9H2F3 369 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 IPO11Q9UI26 975 aaKnown RBP12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 MYO6Q9UM54 1294 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 LHX6Q9UPM6 363 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 NEU3Q9UQ49 428 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 GPSM3Q9Y4H4 160 aa12.61□□□□□ -0.39
CAPRIN1-213ENST00000533562 TDRD6O60522 2096 aaKnown RBP12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 TCRBV5S1A1TA0A578 114 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 IGLON5A6NGN9 336 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 TRIM38O00635 465 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 FPGTO14772 594 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 CCP110O43303 1012 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 CREB3O43889 395 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 UGT2B4P06133 528 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 GKP32189 559 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 HTR7P34969 479 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 RABIFP47224 123 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 HNRNPKP61978 463 aaKnown RBP eCLIP12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 RPL7AP62424 266 aaKnown RBP12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 TYRO3Q06418 890 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 TARDBPQ13148 414 aaKnown RBP eCLIP12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 GSE1Q14687 1217 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 PROX2Q3B8N5 592 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 PARP15Q460N3 678 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 FILIP1LQ4L180 1135 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 PPP1R15BQ5SWA1 713 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 GDPD4Q6W3E5 623 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 LEKR1Q6ZMV7 388 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms