RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 PHF20Q9BVI0 1012 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 SLITRK2Q9H156 845 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 CRISPLD1Q9H336 500 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 CHST12Q9NRB3 414 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 INTS10Q9NVR2 710 aaKnown RBP7.93□□□□□ -1.14
CSRP1-218ENST00000533402 ARHGAP20Q9P2F6 1191 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 ERVK-11Q9UQG0 969 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 NCKAP1Q9Y2A7 1128 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 VPS9D1Q9Y2B5 631 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 ZNF451Q9Y4E5 1061 aa7.93□□□□□ -1.14
CSRP1-218ENST00000533402 IL32P24001 234 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 AZGP1P25311 298 aaKnown RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 CENPAP49450 140 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 PSME3P61289 254 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 PLCL1Q15111 1095 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 CLEC16AQ2KHT3 1053 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 PYHIN1Q6K0P9 492 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 USP49Q70CQ1 688 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 DSG4Q86SJ6 1040 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 PEG10Q86TG7 708 aaKnown RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 P2RY8Q86VZ1 359 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 CIR1Q86X95 450 aaPredicted RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 GTPBP2Q9BX10 602 aaKnown RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 RNF146Q9NTX7 359 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 HPF1Q9NWY4 346 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 PLOD2O00469 737 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 SLC2A3P11169 496 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 RPL35P42766 123 aaKnown RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 ARF3P61204 181 aaPredicted RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 ARF1P84077 181 aaKnown RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 INAVAQ3KP66 663 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 PADI6Q6TGC4 694 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 KCTD8Q6ZWB6 473 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 ACTRT2Q8TDY3 377 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 C12orf43Q96C57 262 aaKnown RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 MRIQ9BWK5 157 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 OR2B2Q9GZK3 357 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 CLN6Q9NWW5 311 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 RGPD2P0DJD1 1756 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 SLC16A2P36021 539 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 CDK8P49336 464 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 GRM4Q14833 912 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 ZNF614Q8N883 585 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 TMC2Q8TDI7 906 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 ZNF512Q96ME7 567 aaPredicted RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 TMEM121Q9BTD3 319 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 RAD54BQ9Y620 910 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 USP54Q70EL1 1684 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 CHURC1-FNTBB4DL54 471 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 CYP7B1O75881 506 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 GSTM5P46439 218 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 PRKAA2P54646 552 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 TPI1P60174 286 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 PPP4CP60510 307 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 NFIXQ14938 502 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 PTAR1Q7Z6K3 402 aaPredicted RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 SLC22A16Q86VW1 577 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 MRPS31Q92665 395 aaKnown RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 CIB1Q99828 191 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 OSGEPQ9NPF4 335 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 POFUT2Q9Y2G5 429 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 POLRMTO00411 1230 aaKnown RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 SLC16A4O15374 487 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 CHI3L1P36222 383 aaPredicted RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 RAB2AP61019 212 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 TMEM132DQ14C87 1099 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 PDK1Q15118 436 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 KCNA10Q16322 511 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 DCAF4L1Q3SXM0 396 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 SPESP1Q6UW49 350 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 TBC1D10CQ8IV04 446 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 TEX47Q8TBZ9 253 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 TPK1Q9H3S4 243 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 SPASTQ9UBP0 616 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 MORF4L1Q9UBU8 362 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 SCAF8Q9UPN6 1271 aaKnown RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 MAGEC1O60732 1142 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 RECQL5O94762 991 aaPredicted RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 CHRNGP07510 517 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 GNAO1P09471 354 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 SSTR1P30872 391 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 SDC2P34741 201 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 MAGEA12P43365 314 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 HARS2P49590 506 aaKnown RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 RPL6Q02878 288 aaKnown RBP7.92□□□□□ -1.14
CSRP1-218ENST00000533402 METTL21CQ5VZV1 264 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 SLC22A9Q8IVM8 553 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 FAM126BQ8IXS8 530 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 COLGALT2Q8IYK4 626 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 IQCKQ8N0W5 287 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 MOSPD2Q8NHP6 518 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 TOP1MTQ969P6 601 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 SYT15Q9BQS2 421 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 RNF112Q9ULX5 631 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 ALS2Q96Q42 1657 aa7.92□□□□□ -1.14
CSRP1-218ENST00000533402 CD44P16070 742 aaKnown RBP7.91□□□□□ -1.14
CSRP1-218ENST00000533402 PDGFRAP16234 1089 aa7.91□□□□□ -1.14
CSRP1-218ENST00000533402 GPC3P51654 580 aa7.91□□□□□ -1.14
CSRP1-218ENST00000533402 CDC42P60953 191 aa7.91□□□□□ -1.14
CSRP1-218ENST00000533402 PTSQ03393 145 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms