RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SIRPGQ9P1W8 387 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 GGT7Q9UJ14 662 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 HOOK1Q9UJC3 728 aaKnown RBP13.28□□□□□ -0.28
COPB1-209ENST00000533096 ITM2BQ9Y287 266 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 ATP6V1DQ9Y5K8 247 aa13.28□□□□□ -0.28
COPB1-209ENST00000533096 ASH1LQ9NR48 2969 aaKnown RBP13.28□□□□□ -0.28
COPB1-209ENST00000533096 CCDC187A0A096LP49 1063 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 DRGXA6NNA5 263 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 CDRT15L2A8MXV6 281 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 BIN1O00499 593 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 KRIT1O00522 736 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 TPP1O14773 563 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 ZNF821O75541 412 aaPredicted RBP13.27□□□□□ -0.29
COPB1-209ENST00000533096 ERBB2P04626 1255 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 HGFP14210 728 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 SLC9A1P19634 815 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 SLC5A2P31639 672 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 KRT9P35527 623 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 CSRP3P50461 194 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 CLCN6P51797 869 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 CCNHP51946 323 aaPredicted RBP13.27□□□□□ -0.29
COPB1-209ENST00000533096 DEUP1Q05D60 604 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 SRSF6Q13247 344 aaKnown RBP13.27□□□□□ -0.29
COPB1-209ENST00000533096 MTA1Q13330 715 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 C5orf22Q49AR2 442 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 PARS2Q7L3T8 475 aaKnown RBP13.27□□□□□ -0.29
COPB1-209ENST00000533096 SETD3Q86TU7 594 aaPredicted RBP13.27□□□□□ -0.29
COPB1-209ENST00000533096 TTC7BQ86TV6 843 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 DRC7Q8IY82 874 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 DCAF4L2Q8NA75 395 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 C1orf131Q8NDD1 294 aaKnown RBP13.27□□□□□ -0.29
COPB1-209ENST00000533096 C1QTNF2Q9BXJ5 285 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 FOXP3Q9BZS1 431 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 PDCL3Q9H2J4 239 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 ASNSD1Q9NWL6 643 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.27□□□□□ -0.291e-13■■□□□ 14.1
COPB1-209ENST00000533096 APOBEC3BQ9UH17 382 aaKnown RBP13.27□□□□□ -0.29
COPB1-209ENST00000533096 MAN1B1Q9UKM7 699 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 CTNND2Q9UQB3 1225 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 SSUH2Q9Y2M2 353 aa13.27□□□□□ -0.29
COPB1-209ENST00000533096 KALRNO60229 2985 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 C16orf96A6NNT2 1141 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 BECN2A8MW95 431 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 PPP1R3GB7ZBB8 358 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 I6L893 689 aaPredicted RBP13.26□□□□□ -0.29
COPB1-209ENST00000533096 TSPAN6O43657 245 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 MMP20O60882 483 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 CTSEP14091 401 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 TSHRP16473 764 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 ITIH2P19823 946 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 ITGB7P26010 798 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 CXCR3P49682 368 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 SNX16P57768 344 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 CCL7P80098 99 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 SKOR1P84550 965 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 SLC20A2Q08357 652 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 PTK2BQ14289 1009 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 LINC00303Q3SY05 128 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 LRRC73Q5JTD7 316 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 TTI2Q6NXR4 508 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 IGF2-ASQ6U949 168 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 RAB11FIP2Q7L804 512 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 B3GNT8Q7Z7M8 397 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 HID1Q8IV36 788 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 TRIM59Q8IWR1 403 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 PHACTR4Q8IZ21 702 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 Q8N9G6 341 aaPredicted RBP13.26□□□□□ -0.29
COPB1-209ENST00000533096 LENG8Q96PV6 779 aaPredicted RBP13.26□□□□□ -0.29
COPB1-209ENST00000533096 CLPBQ9H078 707 aa13.26□□□□□ -0.29
COPB1-209ENST00000533096 PLD2O14939 933 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 DAB1O75553 588 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 TCEA3O75764 348 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 CELA2BP08218 269 aaPredicted RBP13.25□□□□□ -0.29
COPB1-209ENST00000533096 FAM87AP0C7U9 286 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 UGT1A5P35504 534 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 ACVRL1P37023 503 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 EIF4A3P38919 411 aaKnown RBP13.25□□□□□ -0.29
COPB1-209ENST00000533096 ABL2P42684 1182 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 SERPINH1P50454 418 aaKnown RBP13.25□□□□□ -0.29
COPB1-209ENST00000533096 PFN3P60673 137 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 PPARDQ03181 441 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 PTK2Q05397 1052 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 OLFML1Q6UWY5 402 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 ENOSF1Q7L5Y1 443 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 ZNF683Q8IZ20 524 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 PCDH20Q8N6Y1 951 aaKnown RBP13.25□□□□□ -0.29
COPB1-209ENST00000533096 NETO2Q8NC67 525 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 SCG3Q8WXD2 468 aaKnown RBP13.25□□□□□ -0.29
COPB1-209ENST00000533096 NAT6Q93015 286 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 TSACCQ96A04 125 aaPredicted RBP13.25□□□□□ -0.29
COPB1-209ENST00000533096 KLHL32Q96NJ5 620 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 TBCBQ99426 244 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 NPY6RQ99463 290 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 BOCQ9BWV1 1114 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 MBNL1Q9NR56 388 aaKnown RBP13.25□□□□□ -0.29
COPB1-209ENST00000533096 GPR27Q9NS67 375 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 ARHGEF38Q9NXL2 777 aa13.25□□□□□ -0.29
COPB1-209ENST00000533096 ATXN7L1Q9ULK2 861 aaPredicted RBP13.25□□□□□ -0.29
COPB1-209ENST00000533096 PNMA8BQ9ULN7 279 aaPredicted RBP13.25□□□□□ -0.29
COPB1-209ENST00000533096 PTPRQQ9UMZ3 2332 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms