RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 CHD5Q8TDI0 1954 aa18.13■□□□□ 0.49
PCF11-206ENST00000533018 IGSF10Q6WRI0 2623 aa18.13■□□□□ 0.49
PCF11-206ENST00000533018 RAMP2O60895 175 aa18.12■□□□□ 0.49
PCF11-206ENST00000533018 CD160O95971 181 aa18.12■□□□□ 0.49
PCF11-206ENST00000533018 CALB1P05937 261 aa18.12■□□□□ 0.49
PCF11-206ENST00000533018 ALPPL2P10696 532 aa18.12■□□□□ 0.49
PCF11-206ENST00000533018 RFC1P35251 1148 aaPredicted RBP18.12■□□□□ 0.49
PCF11-206ENST00000533018 HDAC4P56524 1084 aa18.12■□□□□ 0.49
PCF11-206ENST00000533018 SNRPD1P62314 119 aaKnown RBP18.12■□□□□ 0.49
PCF11-206ENST00000533018 PROX2Q3B8N5 592 aa18.12■□□□□ 0.49
PCF11-206ENST00000533018 TMEM259Q4ZIN3 620 aa18.12■□□□□ 0.49
PCF11-206ENST00000533018 SLFN11Q7Z7L1 901 aa18.12■□□□□ 0.49
PCF11-206ENST00000533018 NLRP14Q86W24 1093 aa18.12■□□□□ 0.49
PCF11-206ENST00000533018 RETREG1Q9H6L5 497 aa18.12■□□□□ 0.49
PCF11-206ENST00000533018 ANO10Q9NW15 660 aa18.12■□□□□ 0.49
PCF11-206ENST00000533018 FADS3Q9Y5Q0 445 aa18.12■□□□□ 0.49
PCF11-206ENST00000533018 HS3ST3A1Q9Y663 406 aa18.12■□□□□ 0.49
PCF11-206ENST00000533018 ANKRD62A6NC57 917 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 C16orf96A6NNT2 1141 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 BUB1O43683 1085 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 PIAS2O75928 621 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 ACP1P24666 158 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 MYL5Q02045 173 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 PTP4A2Q12974 167 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 CLEC16AQ2KHT3 1053 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 ZNF805Q5CZA5 627 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 EFHC2Q5JST6 749 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 MANEALQ5VSG8 457 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 WDR59Q6PJI9 974 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 CLEC17AQ6ZS10 378 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 ABI3BPQ7Z7G0 1075 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 DCP2Q8IU60 420 aaKnown RBP18.11■□□□□ 0.49
PCF11-206ENST00000533018 SLC22A18ASQ8N1D0 253 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 OR2AP1Q8NGE2 309 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 OR4C6Q8NH72 309 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 FAM174AQ8TBP5 190 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 CENPIQ92674 756 aaPredicted RBP18.11■□□□□ 0.49
PCF11-206ENST00000533018 ISG20Q96AZ6 181 aaKnown RBP18.11■□□□□ 0.49
PCF11-206ENST00000533018 GBP4Q96PP9 640 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 CAAP1Q9H8G2 361 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 SCUBE2Q9NQ36 999 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 CLCA2Q9UQC9 943 aa18.11■□□□□ 0.49
PCF11-206ENST00000533018 POM121BA6NF01 834 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 NEMP2A6NFY4 417 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 IGLON5A6NGN9 336 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 FPGTO14772 594 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 KDELR3O43731 214 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 POP4O95707 220 aaKnown RBP18.1■□□□□ 0.49
PCF11-206ENST00000533018 UGT2B4P06133 528 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 EPHB2P29323 1055 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 E2F1Q01094 437 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 INSM1Q01101 510 aaPredicted RBP18.1■□□□□ 0.49
PCF11-206ENST00000533018 COL9A2Q14055 689 aaPredicted RBP18.1■□□□□ 0.49
PCF11-206ENST00000533018 FGL2Q14314 439 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 STX1AQ16623 288 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 DNAJC24Q6P3W2 148 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 PHF13Q86YI8 300 aaPredicted RBP18.1■□□□□ 0.49
PCF11-206ENST00000533018 PLPP6Q8IY26 295 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 PYROXD2Q8N2H3 581 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 RAB7BQ96AH8 199 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 BMFQ96LC9 184 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 KLHL32Q96NJ5 620 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 AGPAT1Q99943 283 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 LIMA1Q9UHB6 759 aaKnown RBP18.1■□□□□ 0.49
PCF11-206ENST00000533018 ITM2BQ9Y287 266 aa18.1■□□□□ 0.49
PCF11-206ENST00000533018 SMG1Q96Q15 3661 aaKnown RBP18.1■□□□□ 0.49
PCF11-206ENST00000533018 ASXL3Q9C0F0 2248 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 CXorf51AA0A1B0GTR3 108 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 LGALS16A8MUM7 142 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 RAD51BO15315 384 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 TSPAN6O43657 245 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 AP1G1O43747 822 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 CREB3O43889 395 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 GSRP00390 522 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 HNRNPKP61978 463 aaKnown RBP eCLIP18.09■□□□□ 0.49
PCF11-206ENST00000533018 PDE1CQ14123 709 aaPredicted RBP18.09■□□□□ 0.49
PCF11-206ENST00000533018 MYLK3Q32MK0 819 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 ATXN7L2Q5T6C5 722 aaPredicted RBP18.09■□□□□ 0.49
PCF11-206ENST00000533018 KYAT3Q6YP21 454 aaKnown RBP18.09■□□□□ 0.49
PCF11-206ENST00000533018 KDM7AQ6ZMT4 941 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 TTC7BQ86TV6 843 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 C3orf20Q8ND61 904 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 NTAN1Q96AB6 310 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 NRSN2Q9GZP1 204 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 GGT7Q9UJ14 662 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 NEU3Q9UQ49 428 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 BAHCC1Q9P281 2608 aa18.09■□□□□ 0.49
PCF11-206ENST00000533018 BPTFQ12830 3046 aa18.08■□□□□ 0.49
PCF11-206ENST00000533018 ZSCAN5CA6NGD5 496 aaPredicted RBP18.08■□□□□ 0.48
PCF11-206ENST00000533018 SIGLEC16A6NMB1 481 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 GOLGA6L22H0YM25 854 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 H3BM21 787 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 CCP110O43303 1012 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 NEBLO76041 1014 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 MYF5P13349 255 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 DESP17661 470 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 ABL2P42684 1182 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 ABCG1P45844 678 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 RABIFP47224 123 aa18.08■□□□□ 0.48
PCF11-206ENST00000533018 GSCP56915 257 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms