RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 COMMD8Q9NX08 183 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 KCND3Q9UK17 655 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 SLC17A4Q9Y2C5 497 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 SAMM50Q9Y512 469 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 RNF215Q9Y6U7 377 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 CCDC196A0A1B0GTZ2 297 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 CCDC69A6NI79 296 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 C3orf70A6NLC5 250 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 WASH4PA8MWX3 477 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 KCNAB3O43448 404 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 RNASEH1O60930 286 aaKnown RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 CSO75390 466 aaKnown RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 TCEA3O75764 348 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 HOXC4P09017 264 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 PABPC1P11940 636 aaKnown RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 PRLRP16471 622 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 AVPR1AP37288 418 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 CCT8P50990 548 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 UAP1L1Q3KQV9 507 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 NAPEPLDQ6IQ20 393 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 ERN2Q76MJ5 926 aaKnown RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 SIAH3Q8IW03 269 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 ARHGEF19Q8IW93 802 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 FMR1NBQ8N0W7 255 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 CIARTQ8N365 385 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 TEX26Q8N6G2 289 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 BHLHE22Q8NFJ8 381 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 KCNG4Q8TDN1 519 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 KLHL6Q8WZ60 621 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 CNDP2Q96KP4 475 aaKnown RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 PCDHB18PQ96TA0 734 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 PLIN2Q99541 437 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 SEPT5Q99719 369 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 NUDT9Q9BW91 350 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 BTBD1Q9H0C5 482 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 RDH14Q9HBH5 336 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 TRIM39Q9HCM9 518 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 MRPL40Q9NQ50 206 aaKnown RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 ERVW-1Q9UQF0 538 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 PPP1R3GB7ZBB8 358 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 NEDD8-MDP1E9PL57 170 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 LAD1O00515 517 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 INSIG1O15503 277 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 SDC3O75056 442 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 STSP08842 583 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 TIMP2P16035 220 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 PNLIPP16233 465 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 MLLT10P55197 1068 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 IRX6P78412 446 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 SEMG2Q02383 582 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 NCAPHQ15003 741 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 ELF2Q15723 593 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 SETMARQ53H47 684 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 Q6ZVU0 165 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 OTUD6AQ7L8S5 288 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 VASH2Q86V25 355 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 CFAP52Q8N1V2 620 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 STK40Q8N2I9 435 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 EID2Q8N6I1 236 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 PPP1R14CQ8TAE6 165 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 LYSMD1Q96S90 227 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 SMR3AQ99954 134 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 WDR77Q9BQA1 342 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 NUP58Q9BVL2 599 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 PITPNM3Q9BZ71 974 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 C22orf23Q9BZE7 217 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 FOXP3Q9BZS1 431 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 FAM117AQ9C073 453 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 BRD8Q9H0E9 1235 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 DMAP1Q9NPF5 467 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 ETNK2Q9NVF9 386 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 NFKBIL1Q9UBC1 381 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 CTAGE9A4FU28 777 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 CFAP69A5D8W1 941 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 BHMG1C9JSJ3 638 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 H7C4K7 107 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 NPC1O15118 1278 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 NUDT21O43809 227 aaKnown RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 PAK4O96013 591 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 CTAGE8P0CG41 777 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 SCP2P22307 547 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 ACVRL1P37023 503 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 LHX1P48742 406 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 DHPSP49366 369 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 SMCPP49901 116 aaPredicted RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 DNM2P50570 870 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 ADCY2Q08462 1091 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 SF3A1Q15459 793 aaKnown RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 NADK2Q4G0N4 442 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 ANO6Q4KMQ2 910 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 PRAMEF17Q5VTA0 474 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 SLC6A19Q695T7 634 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 DENND1BQ6P3S1 775 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 C11orf74Q86VG3 221 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 CTAGE4Q8IX94 777 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 GALNT15Q8N3T1 639 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 FAM26EQ8N5C1 309 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 FOXJ1Q92949 421 aa1.75□□□□□ -2.13
KNL1-211ENST00000533001 SNRNP40Q96DI7 357 aaKnown RBP1.75□□□□□ -2.13
KNL1-211ENST00000533001 AK8Q96MA6 479 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms