RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CCDC114Q96M63 670 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 KCTD15Q96SI1 283 aaPredicted RBP18.11■□□□□ 0.49
SMG1-203ENST00000532700 SNRNP25Q9BV90 132 aaKnown RBP18.11■□□□□ 0.49
SMG1-203ENST00000532700 GDF3Q9NR23 364 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 LHX3Q9UBR4 397 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 PCSK1NQ9UHG2 260 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 MFHAS1Q9Y4C4 1052 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 FADS3Q9Y5Q0 445 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 TDRD6O60522 2096 aaKnown RBP18.11■□□□□ 0.49
SMG1-203ENST00000532700 ZZEF1O43149 2961 aa18.11■□□□□ 0.49
SMG1-203ENST00000532700 ARID1BQ8NFD5 2236 aaPredicted RBP18.1■□□□□ 0.49
SMG1-203ENST00000532700 FAM149AA5PLN7 773 aa18.1■□□□□ 0.49
SMG1-203ENST00000532700 TAF4O00268 1085 aa18.1■□□□□ 0.49
SMG1-203ENST00000532700 PCDH8O95206 1070 aa18.1■□□□□ 0.49
SMG1-203ENST00000532700 FTLP02792 175 aaPredicted RBP18.1■□□□□ 0.49
SMG1-203ENST00000532700 PSMA2P25787 234 aa18.1■□□□□ 0.49
SMG1-203ENST00000532700 NEK3P51956 506 aa18.1■□□□□ 0.49
SMG1-203ENST00000532700 FANCCQ00597 558 aa18.1■□□□□ 0.49
SMG1-203ENST00000532700 SLC20A2Q08357 652 aa18.1■□□□□ 0.49
SMG1-203ENST00000532700 SETMARQ53H47 684 aaPredicted RBP18.1■□□□□ 0.49
SMG1-203ENST00000532700 EID2Q8N6I1 236 aa18.1■□□□□ 0.49
SMG1-203ENST00000532700 ISG20Q96AZ6 181 aaKnown RBP18.1■□□□□ 0.49
SMG1-203ENST00000532700 CELF6Q96J87 481 aaKnown RBP18.1■□□□□ 0.49
SMG1-203ENST00000532700 EXOC2Q96KP1 924 aa18.1■□□□□ 0.49
SMG1-203ENST00000532700 PDFQ9HBH1 243 aa18.1■□□□□ 0.49
SMG1-203ENST00000532700 AP4E1Q9UPM8 1137 aa18.1■□□□□ 0.49
SMG1-203ENST00000532700 DMTF1Q9Y222 760 aa18.1■□□□□ 0.49
SMG1-203ENST00000532700 FARP1Q9Y4F1 1045 aaPredicted RBP18.1■□□□□ 0.49
SMG1-203ENST00000532700 C16orf96A6NNT2 1141 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 WASH4PA8MWX3 477 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 PRAMEF26H0Y7S4 382 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 J3KR12 359 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 KRIT1O00522 736 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 BUB1O43683 1085 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 TRIM16O95361 564 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 UGT2B4P06133 528 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 RECQLP46063 649 aaPredicted RBP18.09■□□□□ 0.49
SMG1-203ENST00000532700 KLHL30Q0D2K2 578 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 SERINC3Q13530 473 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 CYTH1Q15438 398 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 ARHGAP36Q6ZRI8 547 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 RYBPQ8N488 228 aaPredicted RBP18.09■□□□□ 0.49
SMG1-203ENST00000532700 NPWQ8N729 165 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 OR2AP1Q8NGE2 309 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 ZNF653Q96CK0 615 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 VCPIP1Q96JH7 1222 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 BMFQ96LC9 184 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 LRRC19Q9H756 370 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 DYRK4Q9NR20 520 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 UCKL1Q9NWZ5 548 aa18.09■□□□□ 0.49
SMG1-203ENST00000532700 CNOT8Q9UFF9 292 aaKnown RBP18.09■□□□□ 0.49
SMG1-203ENST00000532700 APOBEC2Q9Y235 224 aaKnown RBP18.09■□□□□ 0.49
SMG1-203ENST00000532700 MYLKQ15746 1914 aa18.08■□□□□ 0.49
SMG1-203ENST00000532700 POM121BA6NF01 834 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 TNFSF14O43557 240 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 LRCH4O75427 683 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 GSRP00390 522 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 THEGLP0DJG4 465 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 IL1R2P27930 398 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 MIPP30301 263 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 RGRP47804 291 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 MAPK8IP2Q13387 824 aaPredicted RBP18.08■□□□□ 0.48
SMG1-203ENST00000532700 STAT4Q14765 748 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 SUZ12Q15022 739 aaKnown RBP18.08■□□□□ 0.48
SMG1-203ENST00000532700 MYLK3Q32MK0 819 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 TXNRD3NBQ6F5E7 133 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 DHRS13Q6UX07 377 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 CCNI2Q6ZMN8 369 aaPredicted RBP18.08■□□□□ 0.48
SMG1-203ENST00000532700 ZNF354CQ86Y25 554 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 CPNE8Q86YQ8 564 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 ARHGAP12Q8IWW6 846 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 UMODL1-AS1Q8N2C9 162 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 SLC25A45Q8N413 288 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 ZCCHC14Q8WYQ9 949 aaKnown RBP18.08■□□□□ 0.48
SMG1-203ENST00000532700 NSMCE3Q96MG7 304 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 KLHL32Q96NJ5 620 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 KLF6Q99612 283 aaPredicted RBP18.08■□□□□ 0.48
SMG1-203ENST00000532700 CDC6Q99741 560 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 DHX35Q9H5Z1 703 aaKnown RBP18.08■□□□□ 0.48
SMG1-203ENST00000532700 PARVAQ9NVD7 372 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 MYO1AQ9UBC5 1043 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 FTSJ1Q9UET6 329 aa18.08■□□□□ 0.48
SMG1-203ENST00000532700 FREM2Q5SZK8 3169 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 CFAP47Q6ZTR5 3102 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 ANKRD62A6NC57 917 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 TRIM38O00635 465 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 PIGNO95427 931 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 ITGAVP06756 1048 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 CCDC172P0C7W6 258 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 GIMD1P0DJR0 217 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 ETFBP38117 255 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 RXRGP48443 463 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 TPI1P60174 286 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 ZNF542PQ5EBM4 170 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 NEK5Q6P3R8 708 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 FBXL19Q6PCT2 694 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 NYAP1Q6ZVC0 841 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 ABI3BPQ7Z7G0 1075 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 IQCHQ86VS3 1027 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 ZSWIM9Q86XI8 627 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms