RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 RALBP11234 206 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 MAGP20916 626 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 CYP3A7P24462 503 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ADSSP30520 456 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 MSX2P35548 267 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 CASP2P42575 452 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 NOVP48745 357 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 SLC12A3P55017 1021 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 OLR1P78380 273 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 DNASE1L3Q13609 305 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 PHKG1Q16816 387 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNF484Q5JVG2 852 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 SPANXN2Q5MJ10 180 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 C6orf10Q5SRN2 563 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ZCCHC8Q6NZY4 707 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 IFNEQ86WN2 208 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ABRAQ8N0Z2 381 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 CLIP4Q8N3C7 705 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 KCTD6Q8NC69 237 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ACTRT2Q8TDY3 377 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 BBS2Q9BXC9 721 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 MTMR12Q9C0I1 747 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 CDH19Q9H159 772 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ACSS3Q9H6R3 686 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 RUBCNLQ9H714 662 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 SP140LQ9H930 580 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 SCN3BQ9NY72 215 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 SESN1Q9Y6P5 492 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 PMF1-BGLAPU3KQ54 211 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 NKRFO15226 690 aaKnown RBP eCLIP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 TIMM44O43615 452 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 MSCO60682 206 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 FCGR1AP12314 374 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 CDH1P12830 882 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNF182P17025 639 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 THOP1P52888 689 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 PRKAA2P54646 552 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 E2F2Q14209 437 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 GRM2Q14416 872 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNF544Q6NX49 715 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 GLB1LQ6UWU2 654 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 C1orf186Q6ZWK4 172 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 GRAMD2AQ8IUY3 354 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 SLC20A1Q8WUM9 679 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 FAM149B1Q96BN6 582 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNF486Q96H40 463 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 TCF12Q99081 682 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 RTKNQ9BST9 563 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 OR2B2Q9GZK3 357 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 EPB41L4BQ9H329 900 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 NXF3Q9H4D5 531 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 MINDY3Q9H8M7 445 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 MAGED2Q9UNF1 606 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 NRCAMQ92823 1304 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 DOCK3Q8IZD9 2030 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 A0A1W2PQ45 241 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 A0A1W2PQY0 241 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 TCRBV7S2A1N4TA0A589 114 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 SAGE2PA6NJ88 616 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 ALOX15BO15296 676 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 ADAM23O75077 832 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 PIAS1O75925 651 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 PSMB9P28065 219 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 POU5F1Q01860 360 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 TRAF3Q13114 568 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 BMPR2Q13873 1038 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 MORN1Q5T089 497 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 KCTD8Q6ZWB6 473 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNF720Q7Z2F6 126 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 SLC22A16Q86VW1 577 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 DHFR2Q86XF0 187 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 DCLK2Q8N568 766 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 HDAC11Q96DB2 347 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNF347Q96SE7 839 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 PCYT2Q99447 389 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 EMILIN2Q9BXX0 1053 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 COQ10BQ9H8M1 238 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 PCDH9Q9HC56 1237 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 XPNPEP1Q9NQW7 623 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 AGPAT3Q9NRZ7 376 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 FAM49BQ9NUQ9 324 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 CCDC59Q9P031 241 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 EBF1Q9UH73 591 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNHIT2Q9UHR6 403 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 PTBP2Q9UKA9 531 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 PSME2Q9UL46 239 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 COMMD10Q9Y6G5 202 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 SLC30A1Q9Y6M5 507 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 RGSL1A5PLK6 1076 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 H0YCG3 227 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 TRIM38O00635 465 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 SCAMP3O14828 347 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 ICMTO60725 284 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 TADA2AO75478 443 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 B3GALNT1O75752 331 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 AKAP3O75969 853 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 ETFBP38117 255 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 SCNN1GP51170 649 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 VAMP7P51809 220 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 BMXP51813 675 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms