RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 KLHL15Q96M94 604 aa6.32□□□□□ -1.4
CASP4-208ENST00000530309 HEMGNQ9BXL5 484 aa6.32□□□□□ -1.4
CASP4-208ENST00000530309 B3GNT4Q9C0J1 378 aa6.32□□□□□ -1.4
CASP4-208ENST00000530309 WDR6Q9NNW5 1121 aaKnown RBP6.32□□□□□ -1.4
CASP4-208ENST00000530309 TUBA8Q9NY65 449 aaPredicted RBP6.32□□□□□ -1.4
CASP4-208ENST00000530309 TBC1D14Q9P2M4 693 aa6.32□□□□□ -1.4
CASP4-208ENST00000530309 PCDHA12Q9UN75 941 aa6.32□□□□□ -1.4
CASP4-208ENST00000530309 COG5Q9UP83 839 aa6.32□□□□□ -1.4
CASP4-208ENST00000530309 A0A096LPK6 155 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 SLC25A17O43808 307 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 DDX58O95786 925 aaKnown RBP6.31□□□□□ -1.4
CASP4-208ENST00000530309 FGBP02675 491 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 MYZAPP0CAP1 466 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 SLC2A4P14672 509 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 CHMP24386 653 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 RFC1P35251 1148 aaPredicted RBP6.31□□□□□ -1.4
CASP4-208ENST00000530309 ABCG1P45844 678 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 GPR12P47775 334 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 SRSF1Q07955 248 aaKnown RBP eCLIP6.31□□□□□ -1.4
CASP4-208ENST00000530309 NEXNQ0ZGT2 675 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 TAF11Q15544 211 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 COLEC12Q5KU26 742 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 HAUS3Q68CZ6 603 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 FAM83HQ6ZRV2 1179 aaPredicted RBP6.31□□□□□ -1.4
CASP4-208ENST00000530309 GPAT4Q86UL3 456 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 CAMK1DQ8IU85 385 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 HORMAD2Q8N7B1 307 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 NANOGP1Q8N7R0 232 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 RASSF8Q8NHQ8 419 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 TMEM174Q8WUU8 243 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 MAP6D1Q9H9H5 199 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 PCDHB16Q9NRJ7 776 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 C20orf141Q9NUB4 165 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 HEY2Q9UBP5 337 aa6.31□□□□□ -1.4
CASP4-208ENST00000530309 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.31□□□□□ -1.4
CASP4-208ENST00000530309 TDRD9Q8NDG6 1382 aaKnown RBP6.31□□□□□ -1.4
CASP4-208ENST00000530309 CBY3A6NI87 242 aa6.3□□□□□ -1.4
CASP4-208ENST00000530309 HSPB6O14558 160 aa6.3□□□□□ -1.4
CASP4-208ENST00000530309 HSPA1AP0DMV8 641 aaKnown RBP6.3□□□□□ -1.4
CASP4-208ENST00000530309 HSPA1BP0DMV9 641 aaKnown RBP6.3□□□□□ -1.4
CASP4-208ENST00000530309 PTPN2P17706 415 aa6.3□□□□□ -1.4
CASP4-208ENST00000530309 POU1F1P28069 291 aa6.3□□□□□ -1.4
CASP4-208ENST00000530309 CTCFP49711 727 aaPredicted RBP6.3□□□□□ -1.4
CASP4-208ENST00000530309 EIF3BP55884 814 aaKnown RBP6.3□□□□□ -1.4
CASP4-208ENST00000530309 DCAF7P61962 342 aa6.3□□□□□ -1.4
CASP4-208ENST00000530309 RBMS2Q15434 407 aaKnown RBP6.3□□□□□ -1.4
CASP4-208ENST00000530309 TBCEQ15813 527 aaPredicted RBP6.3□□□□□ -1.4
CASP4-208ENST00000530309 NCAPH2Q6IBW4 605 aa6.3□□□□□ -1.4
CASP4-208ENST00000530309 CPLX4Q7Z7G2 160 aa6.3□□□□□ -1.4
CASP4-208ENST00000530309 PIP4P1Q86T03 277 aa6.3□□□□□ -1.4
CASP4-208ENST00000530309 KCNG4Q8TDN1 519 aa6.3□□□□□ -1.4
CASP4-208ENST00000530309 DECR2Q9NUI1 292 aa6.3□□□□□ -1.4
CASP4-208ENST00000530309 GAGE12JA6NER3 117 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 PGPEP1LA6NFU8 196 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 NPIPB15A6NHN6 443 aaPredicted RBP6.29□□□□□ -1.4
CASP4-208ENST00000530309 EBAG9O00559 213 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 MDM4O15151 490 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 LDLRAD4O15165 306 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 IFNA2P01563 188 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 KLKB1P03952 638 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 CLEC3BP05452 202 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 HEXAP06865 529 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 MMP3P08254 477 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 ENO3P13929 434 aaPredicted RBP6.29□□□□□ -1.4
CASP4-208ENST00000530309 PRF1P14222 555 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 CTPS1P17812 591 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 PTGER1P34995 402 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 CPOXP36551 454 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 CASP2P42575 452 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 ALDH7A1P49419 539 aaKnown RBP6.29□□□□□ -1.4
CASP4-208ENST00000530309 EIF5P55010 431 aaKnown RBP6.29□□□□□ -1.4
CASP4-208ENST00000530309 MANEAQ5SRI9 462 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 PXDC1Q5TGL8 231 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 ATG9BQ674R7 924 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 C4orf50Q6ZRC1 276 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 CADM3Q8N126 398 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 ARFGAP1Q8N6T3 406 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 ETNPPLQ8TBG4 499 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 DENND1AQ8TEH3 1009 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 RPL36ALQ969Q0 106 aaKnown RBP6.29□□□□□ -1.4
CASP4-208ENST00000530309 RANBP17Q9H2T7 1088 aaKnown RBP6.29□□□□□ -1.4
CASP4-208ENST00000530309 FZD3Q9NPG1 666 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 SPATS2LQ9NUQ6 558 aaKnown RBP6.29□□□□□ -1.4
CASP4-208ENST00000530309 HS3ST3B1Q9Y662 390 aa6.29□□□□□ -1.4
CASP4-208ENST00000530309 WDR91A4D1P6 747 aa6.28□□□□□ -1.4
CASP4-208ENST00000530309 HMGB1P1B2RPK0 211 aaPredicted RBP6.28□□□□□ -1.4
CASP4-208ENST00000530309 STMND1H3BQB6 276 aa6.28□□□□□ -1.4
CASP4-208ENST00000530309 TGFB1I1O43294 461 aa6.28□□□□□ -1.4
CASP4-208ENST00000530309 USO1O60763 962 aaKnown RBP6.28□□□□□ -1.4
CASP4-208ENST00000530309 ZC3H11AO75152 810 aaKnown RBP eCLIP6.28□□□□□ -1.4
CASP4-208ENST00000530309 NDUFB8O95169 186 aa6.28□□□□□ -1.4
CASP4-208ENST00000530309 ZNF8P17098 575 aaPredicted RBP6.28□□□□□ -1.4
CASP4-208ENST00000530309 PSMA4P25789 261 aaKnown RBP6.28□□□□□ -1.4
CASP4-208ENST00000530309 TTKP33981 857 aa6.28□□□□□ -1.4
CASP4-208ENST00000530309 RYKP34925 604 aa6.28□□□□□ -1.4
CASP4-208ENST00000530309 RGS2P41220 211 aa6.28□□□□□ -1.4
CASP4-208ENST00000530309 ME1P48163 572 aa6.28□□□□□ -1.4
CASP4-208ENST00000530309 POLD2P49005 469 aa6.28□□□□□ -1.4
CASP4-208ENST00000530309 EFNA5P52803 228 aa6.28□□□□□ -1.4
CASP4-208ENST00000530309 TMPRSS3P57727 454 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms