RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ATP6V1DQ9Y5K8 247 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 FADS3Q9Y5Q0 445 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 CREBBPQ92793 2442 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 RELNP78509 3460 aa10.63□□□□□ -0.71
COPB1-207ENST00000529866 A0A1W2PQC6 194 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 E5RJQ4 531 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 K7ERQ8 282 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 TOR1BO14657 336 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 SPINT1O43278 529 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 MED7O43513 233 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 TSPAN6O43657 245 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 GCATO75600 419 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 CALCAP01258 141 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 RPLP0P05388 317 aaKnown RBP10.62□□□□□ -0.71
COPB1-207ENST00000529866 GLI1P08151 1106 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 ALPIP09923 528 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 HGFP14210 728 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 CR2P20023 1033 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 BMP6P22004 513 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 L1CAMP32004 1257 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 BLKP51451 505 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 PITX1P78337 314 aaPredicted RBP10.62□□□□□ -0.71
COPB1-207ENST00000529866 FKBP3Q00688 224 aaKnown RBP10.62□□□□□ -0.71
COPB1-207ENST00000529866 C1orf61Q13536 156 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 EIF4EBP2Q13542 120 aaPredicted RBP10.62□□□□□ -0.71
COPB1-207ENST00000529866 ELOCQ15369 112 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 COBLL1Q53SF7 1204 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 FAXCQ5TGI0 409 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 ISM2Q6H9L7 571 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 RETSATQ6NUM9 610 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 MACC1Q6ZN28 852 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 SETD3Q86TU7 594 aaPredicted RBP10.62□□□□□ -0.71
COPB1-207ENST00000529866 VASH2Q86V25 355 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 SDR16C5Q8N3Y7 309 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 FSTL5Q8N475 847 aaPredicted RBP10.62□□□□□ -0.71
COPB1-207ENST00000529866 ZNF564Q8TBZ8 553 aaPredicted RBP10.62□□□□□ -0.71
COPB1-207ENST00000529866 ASB12Q8WXK4 309 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 SLC35C1Q96A29 364 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 RAB7BQ96AH8 199 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 CCDC74AQ96AQ1 378 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 ARHGEF26Q96DR7 871 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 CMKLR1Q99788 373 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 C1QTNF7Q9BXJ2 289 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 C1QTNF2Q9BXJ5 285 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 SLC4A5Q9BY07 1137 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 CPEB1Q9BZB8 566 aaKnown RBP10.62□□□□□ -0.71
COPB1-207ENST00000529866 FOXP3Q9BZS1 431 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 CEP44Q9C0F1 390 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 TNKS2Q9H2K2 1166 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 HS3ST4Q9Y661 456 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 WASF2Q9Y6W5 498 aa10.62□□□□□ -0.71
COPB1-207ENST00000529866 IGLON5A6NGN9 336 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 RNF225M0QZC1 329 aaPredicted RBP10.61□□□□□ -0.71
COPB1-207ENST00000529866 YY2O15391 372 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 SMAD6O43541 496 aaKnown RBP10.61□□□□□ -0.71
COPB1-207ENST00000529866 HSF2BPO75031 334 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 ENDOD1O94919 500 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 ADCY5O95622 1261 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 TSHRP16473 764 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 GGCXP38435 758 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 FMO5P49326 533 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 IRAK1P51617 712 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 YPEL5P62699 121 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 GCNT1Q02742 428 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 PPARDQ03181 441 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 NME3Q13232 169 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 TPRG1LQ5T0D9 272 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 TMEM164Q5U3C3 297 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 BORAQ6PGQ7 559 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 LVRNQ6Q4G3 990 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 LINGO4Q6UY18 593 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 PARS2Q7L3T8 475 aaKnown RBP10.61□□□□□ -0.71
COPB1-207ENST00000529866 TMEM110Q86TL2 294 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 PCDH20Q8N6Y1 951 aaKnown RBP10.61□□□□□ -0.71
COPB1-207ENST00000529866 KYQ8NBH2 561 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 PCDH19Q8TAB3 1148 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 KAT5Q92993 513 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 SLC2A13Q96QE2 648 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 PSMB7Q99436 277 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 KLF6Q99612 283 aaPredicted RBP10.61□□□□□ -0.71
COPB1-207ENST00000529866 HEPHQ9BQS7 1158 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 EPN3Q9H201 632 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 TCEAL2Q9H3H9 227 aaPredicted RBP10.61□□□□□ -0.71
COPB1-207ENST00000529866 METTL14Q9HCE5 456 aaKnown RBP10.61□□□□□ -0.71
COPB1-207ENST00000529866 ASNSD1Q9NWL6 643 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 AKAP7Q9P0M2 348 aaPredicted RBP10.61□□□□□ -0.71
COPB1-207ENST00000529866 SIRPGQ9P1W8 387 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 MAN1B1Q9UKM7 699 aa10.61□□□□□ -0.71
COPB1-207ENST00000529866 PRAMEF33A0A0G2JMD5 474 aa10.6□□□□□ -0.71
COPB1-207ENST00000529866 CASC3O15234 703 aaKnown RBP10.6□□□□□ -0.71
COPB1-207ENST00000529866 PMM2O15305 246 aa10.6□□□□□ -0.71
COPB1-207ENST00000529866 PRAMEF10O60809 474 aa10.6□□□□□ -0.71
COPB1-207ENST00000529866 PAGE1O75459 146 aa10.6□□□□□ -0.71
COPB1-207ENST00000529866 KRT5P13647 590 aa10.6□□□□□ -0.71
COPB1-207ENST00000529866 CTSEP14091 401 aa10.6□□□□□ -0.71
COPB1-207ENST00000529866 CASRP41180 1078 aa10.6□□□□□ -0.71
COPB1-207ENST00000529866 SERPINH1P50454 418 aaKnown RBP10.6□□□□□ -0.71
COPB1-207ENST00000529866 ATP1A2P50993 1020 aa10.6□□□□□ -0.71
COPB1-207ENST00000529866 DNA2P51530 1060 aa10.6□□□□□ -0.71
COPB1-207ENST00000529866 CCNHP51946 323 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms