RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 HOXD12P35452 270 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 ADD2P35612 726 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 IL15P40933 162 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-212ENST00000529046 KRTAP10-11P60412 298 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 SSBP2P81877 361 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-212ENST00000529046 DMWDQ09019 674 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 SF3A3Q12874 501 aaKnown RBP eCLIP5.26□□□□□ -1.57
CSDE1-212ENST00000529046 SLC14A1Q13336 389 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 SMAD1Q15797 465 aaKnown RBP5.26□□□□□ -1.57
CSDE1-212ENST00000529046 CCL15Q16663 113 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 GORABQ5T7V8 394 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 VSTM1Q6UX27 236 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 C17orf99Q6UX52 265 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 ZNF813Q6ZN06 617 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 RFX8Q6ZV50 586 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 YTHDF3Q7Z739 585 aaKnown RBP5.26□□□□□ -1.57
CSDE1-212ENST00000529046 ANKRD23Q86SG2 305 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 NEK8Q86SG6 692 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 GLCCI1Q86VQ1 547 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 HERC6Q8IVU3 1022 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 ANKRD42Q8N9B4 389 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 PNLDC1Q8NA58 520 aaKnown RBP5.26□□□□□ -1.57
CSDE1-212ENST00000529046 SCARB1Q8WTV0 552 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 CCT6BQ92526 530 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 ZNF333Q96JL9 665 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 CCDC17Q96LX7 622 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 ASB2Q96Q27 587 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 ELOVL1Q9BW60 279 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 ADGRE3Q9BY15 652 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 API5Q9BZZ5 524 aaKnown RBP5.26□□□□□ -1.57
CSDE1-212ENST00000529046 SLC45A1Q9Y2W3 748 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 PCDHB7Q9Y5E2 793 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 PCDHGB3Q9Y5G1 929 aa5.26□□□□□ -1.57
CSDE1-212ENST00000529046 RBBP6Q7Z6E9 1792 aaKnown RBP5.25□□□□□ -1.57
CSDE1-212ENST00000529046 H0Y3Z8 333 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 CCER2I3L3R5 266 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 PPP6CO00743 305 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 PPP6R2O75170 966 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 TUBB4AP04350 444 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 UBTFL1P0CB47 393 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-212ENST00000529046 HSD3B1P14060 373 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 NDUFS1P28331 727 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 AKT1P31749 480 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 MCM2P49736 904 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 SEC23BQ15437 767 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 GALNTL6Q49A17 601 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 CEP78Q5JTW2 689 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 DGAT2L7PQ6IED9 249 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 CDC42EP5Q6NZY7 148 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 TMEM65Q6PI78 240 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 ANKS1BQ7Z6G8 1248 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 MOGAT3Q86VF5 341 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 RFX6Q8HWS3 928 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 SUGP1Q8IWZ8 645 aaKnown RBP5.25□□□□□ -1.57
CSDE1-212ENST00000529046 OR6Y1Q8NGX8 325 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 CD99L2Q8TCZ2 262 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 IGFBPL1Q8WX77 278 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 AKAP1Q92667 903 aaKnown RBP eCLIP5.25□□□□□ -1.57
CSDE1-212ENST00000529046 EIF3CQ99613 913 aaKnown RBP5.25□□□□□ -1.57
CSDE1-212ENST00000529046 LIN7CQ9NUP9 197 aaKnown RBP5.25□□□□□ -1.57
CSDE1-212ENST00000529046 NDUFAF4Q9P032 175 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 LUZP4Q9P127 313 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 DGKBQ9Y6T7 804 aa5.25□□□□□ -1.57
CSDE1-212ENST00000529046 GAKO14976 1311 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 GPR75-ASB3A0A0A6YYF3 556 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 C3orf70A6NLC5 250 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-212ENST00000529046 IPO8O15397 1037 aaKnown RBP5.24□□□□□ -1.57
CSDE1-212ENST00000529046 KAT7O95251 611 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 THBS4P35443 961 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 IDUAP35475 653 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 STAT6P42226 847 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 AGTR2P50052 363 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 RARSP54136 660 aaKnown RBP5.24□□□□□ -1.57
CSDE1-212ENST00000529046 PPFIA1Q13136 1202 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 CBFBQ13951 182 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 ZRSR2Q15696 482 aaKnown RBP5.24□□□□□ -1.57
CSDE1-212ENST00000529046 P3H1Q32P28 736 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 CERKLQ49MI3 558 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-212ENST00000529046 SLC9C1Q4G0N8 1177 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 MORN5Q5VZ52 161 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 ZNF425Q6IV72 752 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 SLC18B1Q6NT16 456 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 WDR93Q6P2C0 686 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 TMED8Q6PL24 325 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-212ENST00000529046 RANBP10Q6VN20 620 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 FASTKD5Q7L8L6 764 aaKnown RBP5.24□□□□□ -1.57
CSDE1-212ENST00000529046 CCDC117Q8IWD4 279 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-212ENST00000529046 CPT1BQ92523 772 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 ZKSCAN4Q969J2 545 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-212ENST00000529046 REXO5Q96IC2 774 aaKnown RBP5.24□□□□□ -1.57
CSDE1-212ENST00000529046 SH2D3AQ9BRG2 576 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 PAGR1Q9BTK6 254 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 CCDC134Q9H6E4 229 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 RASSF1Q9NS23 344 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 SLC22A11Q9NSA0 550 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 SMC4Q9NTJ3 1288 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 TMLHEQ9NVH6 421 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 MAFFQ9ULX9 164 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 RFX7Q2KHR2 1363 aa5.24□□□□□ -1.57
CSDE1-212ENST00000529046 KAT6AQ92794 2004 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms