RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 CENPIQ92674 756 aaPredicted RBP9.24□□□□□ -0.93
CMTM1-210ENST00000528441 ARRDC3Q96B67 414 aa9.24□□□□□ -0.93
CMTM1-210ENST00000528441 HMCESQ96FZ2 354 aa9.24□□□□□ -0.93
CMTM1-210ENST00000528441 EXOC2Q96KP1 924 aa9.24□□□□□ -0.93
CMTM1-210ENST00000528441 SNRNP25Q9BV90 132 aaKnown RBP9.24□□□□□ -0.93
CMTM1-210ENST00000528441 NUP85Q9BW27 656 aa9.24□□□□□ -0.93
CMTM1-210ENST00000528441 CINPQ9BW66 212 aaPredicted RBP9.24□□□□□ -0.93
CMTM1-210ENST00000528441 KDM4CQ9H3R0 1056 aa9.24□□□□□ -0.93
CMTM1-210ENST00000528441 RETREG1Q9H6L5 497 aa9.24□□□□□ -0.93
CMTM1-210ENST00000528441 FZD3Q9NPG1 666 aa9.24□□□□□ -0.93
CMTM1-210ENST00000528441 CTTNBP2NLQ9P2B4 639 aa9.24□□□□□ -0.93
CMTM1-210ENST00000528441 PPM1HQ9ULR3 514 aa9.24□□□□□ -0.93
CMTM1-210ENST00000528441 APOBEC2Q9Y235 224 aaKnown RBP9.24□□□□□ -0.93
CMTM1-210ENST00000528441 SLCO1B1Q9Y6L6 691 aa9.24□□□□□ -0.93
CMTM1-210ENST00000528441 ASCC3Q8N3C0 2202 aaKnown RBP9.24□□□□□ -0.93
CMTM1-210ENST00000528441 PCDH15Q96QU1 1955 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 PRAMEF26H0Y7S4 382 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 H0Y8X5 98 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 MYO1FO00160 1098 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 KDELR3O43731 214 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 DFNA5O60443 496 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 CTSLP07711 333 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 MIPP30301 263 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 GKP32189 559 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 NUDT1P36639 197 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 GRK6P43250 576 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 YBEYP58557 167 aaPredicted RBP9.23□□□□□ -0.93
CMTM1-210ENST00000528441 OGDHQ02218 1023 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 MANEALQ5VSG8 457 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 AGBL4Q5VU57 503 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 PLEKHA7Q6IQ23 1121 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 NLRP14Q86W24 1093 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 HORMAD1Q86X24 394 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 GATAD2AQ86YP4 633 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 BBS5Q8N3I7 341 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 CXorf40AQ8TE69 158 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 ARHGEF26Q96DR7 871 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 KLHDC7BQ96G42 594 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 FEM1CQ96JP0 617 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 KLHL32Q96NJ5 620 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 CNTNAP3BQ96NU0 1288 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 KCTD15Q96SI1 283 aaPredicted RBP9.23□□□□□ -0.93
CMTM1-210ENST00000528441 ELF4Q99607 663 aaPredicted RBP9.23□□□□□ -0.93
CMTM1-210ENST00000528441 OSBPL1AQ9BXW6 950 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 CNTNAP3Q9BZ76 1288 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 TTYH3Q9C0H2 523 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 THAP2Q9H0W7 228 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 FTSJ1Q9UET6 329 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 IP6K2Q9UHH9 426 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 CAPN11Q9UMQ6 739 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 DMTF1Q9Y222 760 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 CA5BQ9Y2D0 317 aa9.23□□□□□ -0.93
CMTM1-210ENST00000528441 TMEM191CA6NGB0 347 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 EIF3CLB5ME19 914 aaKnown RBP9.22□□□□□ -0.93
CMTM1-210ENST00000528441 TLR4O00206 839 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 TM4SF5O14894 197 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 VILLO15195 856 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 YKT6O15498 198 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 HYAL3O43820 417 aaPredicted RBP9.22□□□□□ -0.93
CMTM1-210ENST00000528441 SDC3O75056 442 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 PALMO75781 387 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 TRIM16O95361 564 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 POP4O95707 220 aaKnown RBP9.22□□□□□ -0.93
CMTM1-210ENST00000528441 GSRP00390 522 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 GYPCP04921 128 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 THEGLP0DJG4 465 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 ADRB3P13945 408 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 CD59P13987 128 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 ERCC2P18074 760 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 HNRNPA2B1P22626 353 aaKnown RBP9.22□□□□□ -0.93
CMTM1-210ENST00000528441 ITGB7P26010 798 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 HTR7P34969 479 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 SERPINB6P35237 376 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 RPS21P63220 83 aaKnown RBP9.22□□□□□ -0.93
CMTM1-210ENST00000528441 PIGHQ14442 188 aaPredicted RBP9.22□□□□□ -0.93
CMTM1-210ENST00000528441 ZNF235Q14590 738 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 ZNF423Q2M1K9 1284 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 LRRC73Q5JTD7 316 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 KCNT1Q5JUK3 1230 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 PIP5KL1Q5T9C9 394 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 SPECC1LQ69YQ0 1117 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 ALKBH5Q6P6C2 394 aaKnown RBP9.22□□□□□ -0.93
CMTM1-210ENST00000528441 TMCO3Q6UWJ1 677 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 GDPD4Q6W3E5 623 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 RFX8Q6ZV50 586 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 PARS2Q7L3T8 475 aaKnown RBP9.22□□□□□ -0.93
CMTM1-210ENST00000528441 TTC7BQ86TV6 843 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 TRIM69Q86WT6 500 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 PNPLA1Q8N8W4 532 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 ZNF564Q8TBZ8 553 aaPredicted RBP9.22□□□□□ -0.93
CMTM1-210ENST00000528441 CASKIN2Q8WXE0 1202 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 SYN2Q92777 582 aaPredicted RBP9.22□□□□□ -0.93
CMTM1-210ENST00000528441 BTBD6Q96KE9 485 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 EIF3CQ99613 913 aaKnown RBP9.22□□□□□ -0.93
CMTM1-210ENST00000528441 CDC6Q99741 560 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 C1QTNF7Q9BXJ2 289 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 TRIM7Q9C029 511 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 TRIM5Q9C035 493 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 OSGEPQ9NPF4 335 aa9.22□□□□□ -0.93
CMTM1-210ENST00000528441 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms