RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 PROCP04070 461 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 SERPINE1P05121 402 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 HLA-DPA1P20036 260 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 CRABP2P29373 138 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 CD86P42081 329 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 ARCN1P48444 511 aaKnown RBP14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 GNA12Q03113 381 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 BST1Q10588 318 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 SF3A3Q12874 501 aaKnown RBP eCLIP14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 ZNF235Q14590 738 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 POU6F1Q14863 301 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 TAF1BQ53T94 588 aaPredicted RBP14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 ALG1LQ6GMV1 187 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 ZC3HC1Q86WB0 502 aaKnown RBP14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 TMEM199Q8N511 208 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 FEM1CQ96JP0 617 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 AGAP2Q99490 1192 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 KLF16Q9BXK1 252 aaPredicted RBP14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 C11orf49Q9H6J7 331 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 MRPL17Q9NRX2 175 aaKnown RBP14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 SEPT3Q9UH03 358 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 STOML2Q9UJZ1 356 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 CHKBQ9Y259 395 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 YIPF1Q9Y548 306 aa14.95□□□□□ -0.02
ECHDC1-220ENST00000528402 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 KIAA0355O15063 1070 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 KDELR3O43731 214 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 RASSF9O75901 435 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 FGF1P05230 155 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 DLDP09622 509 aaKnown RBP14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 CPA3P15088 417 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 RPL17P18621 184 aaKnown RBP14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 GJA8P48165 433 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 KCNQ1P51787 676 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 KPNA2P52292 529 aaKnown RBP14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 ZNF177Q13360 481 aaPredicted RBP14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 SLC12A1Q13621 1099 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 ADGRF1Q5T601 910 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 TSTD2Q5T7W7 516 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 FAM91A1Q658Y4 838 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 CLEC14AQ86T13 490 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 WDR75Q8IWA0 830 aaKnown RBP14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 C2CD4AQ8NCU7 369 aaPredicted RBP14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 ARRDC2Q8TBH0 407 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 PPP4R1Q8TF05 950 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 INPP5DQ92835 1189 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 ZNF419Q96HQ0 510 aaPredicted RBP14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 ZNF333Q96JL9 665 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 MYLK2Q9H1R3 596 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 PDFQ9HBH1 243 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 COPG2Q9UBF2 871 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 ZFP69BQ9UJL9 534 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 EMCNQ9ULC0 261 aa14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 ARIH1Q9Y4X5 557 aaPredicted RBP14.94□□□□□ -0.02
ECHDC1-220ENST00000528402 A0A1B0GVM2 712 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 TCAF2A6NFQ2 919 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 SLC7A4O43246 635 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 STC2O76061 302 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 SNUPNO95149 360 aaKnown RBP14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 VAPBO95292 243 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 C2P06681 752 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 MMP2P08253 660 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 SERPINF2P08697 491 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 HOXB8P17481 243 aaPredicted RBP14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 CSRP3P50461 194 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 NCALDP61601 193 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 HTRA3P83110 453 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 POU4F1Q01851 419 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 ASPHQ12797 758 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 SPRED3Q2MJR0 410 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 NEPROQ6NW34 567 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 ESRP1Q6NXG1 681 aaKnown RBP14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 DNAJB7Q7Z6W7 309 aaPredicted RBP14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 SCG3Q8WXD2 468 aaKnown RBP14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 KLHL29Q96CT2 875 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 ERP27Q96DN0 273 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 IFT43Q96FT9 208 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 KLHL5Q96PQ7 755 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 RAB3IPQ96QF0 476 aaPredicted RBP14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 WWP1Q9H0M0 922 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 SLC40A1Q9NP59 571 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 ARHGEF3Q9NR81 526 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 SLC17A6Q9P2U8 582 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 SORCS3Q9UPU3 1222 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 TBC1D30Q9Y2I9 924 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 PCDHB12Q9Y5F1 795 aa14.93□□□□□ -0.02
ECHDC1-220ENST00000528402 A0A0G2JND7 137 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 MROH6A6NGR9 719 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 TMEM114B3SHH9 223 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 PRRG1O14668 218 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 CCDC22O60826 627 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 GJB5O95377 273 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 GSRP00390 522 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 AHSGP02765 367 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 PFKLP17858 780 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 CORO1AP31146 461 aaKnown RBP14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 CD151P48509 253 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 HK2P52789 917 aa14.92□□□□□ -0.02
ECHDC1-220ENST00000528402 OXCT1P55809 520 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms