RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 HSPH1Q92598 858 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 BTBD6Q96KE9 485 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 EXOC2Q96KP1 924 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 HDAC8Q9BY41 377 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 GDF3Q9NR23 364 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 DONSONQ9NYP3 566 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 ANAPC7Q9UJX3 599 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 PCOLCE2Q9UKZ9 415 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 DMTF1Q9Y222 760 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 BTBD3Q9Y2F9 522 aa15.79■□□□□ 0.12
CAPN1-213ENST00000527897 PRAMEF26H0Y7S4 382 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 TLR4O00206 839 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 DFFAO00273 331 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 NEMP1O14524 444 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 HYAL3O43820 417 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-213ENST00000527897 POP4O95707 220 aaKnown RBP15.78■□□□□ 0.12
CAPN1-213ENST00000527897 IGSF6O95976 241 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 GSRP00390 522 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 HTR7P34969 479 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 RAD51Q06609 339 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 ZNF423Q2M1K9 1284 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 MYLK3Q32MK0 819 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 CCDC157Q569K6 752 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 LRRC73Q5JTD7 316 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 ALKBH5Q6P6C2 394 aaKnown RBP15.78■□□□□ 0.12
CAPN1-213ENST00000527897 RFX8Q6ZV50 586 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 GATAD2AQ86YP4 633 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 UMODL1-AS1Q8N2C9 162 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 PNPLA1Q8N8W4 532 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 GDAP1L1Q96MZ0 367 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 KLHL32Q96NJ5 620 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 ELF4Q99607 663 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-213ENST00000527897 NCAPGQ9BPX3 1015 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 NUP85Q9BW27 656 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 SCNM1Q9BWG6 230 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 UBA2Q9UBT2 640 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-213ENST00000527897 PCDHGB2Q9Y5G2 931 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 TRPM6Q9BX84 2022 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 TPRP12270 2363 aaKnown RBP15.78■□□□□ 0.12
CAPN1-213ENST00000527897 CHD8Q9HCK8 2581 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 SPEGQ15772 3267 aa15.78■□□□□ 0.12
CAPN1-213ENST00000527897 A0A1B0GTQ1 180 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 ARHGAP42A6NI28 874 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 C16orf96A6NNT2 1141 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 C10orf142B7Z368 130 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 J3KR12 359 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 DFNA5O60443 496 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 TPM1P09493 284 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 TCF4P15884 667 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 ERCC2P18074 760 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 AKT2P31751 481 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 NUDT1P36639 197 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 EIF4A3P38919 411 aaKnown RBP15.77■□□□□ 0.12
CAPN1-213ENST00000527897 PAPOLAP51003 745 aaKnown RBP15.77■□□□□ 0.12
CAPN1-213ENST00000527897 NDST2P52849 883 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 NXPH1P58417 271 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 ZNF284Q2VY69 593 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 ZNF805Q5CZA5 627 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 SPECC1LQ69YQ0 1117 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 NEK5Q6P3R8 708 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 CYP4V2Q6ZWL3 525 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-213ENST00000527897 CHCHD4Q8N4Q1 142 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 MFSD2AQ8NA29 543 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 ARHGEF26Q96DR7 871 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 SLC39A8Q9C0K1 460 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 DEF6Q9H4E7 631 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 LRRC19Q9H756 370 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 ZFR2Q9UPR6 939 aaKnown RBP15.77■□□□□ 0.12
CAPN1-213ENST00000527897 ITM2BQ9Y287 266 aa15.77■□□□□ 0.12
CAPN1-213ENST00000527897 FRYQ5TBA9 3013 aa15.77■□□□□ 0.11
CAPN1-213ENST00000527897 CXorf51AA0A1B0GTR3 108 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 EIF3CLB5ME19 914 aaKnown RBP15.76■□□□□ 0.11
CAPN1-213ENST00000527897 CBFA2T3O75081 653 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 ITGAVP06756 1048 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 FTH1P19P0C7X4 201 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 HNRNPA2B1P22626 353 aaKnown RBP15.76■□□□□ 0.11
CAPN1-213ENST00000527897 IL1R2P27930 398 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 PCK1P35558 622 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 GJC1P36383 396 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 ARL4AP40617 200 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 GRK6P43250 576 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 ARRB1P49407 418 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-213ENST00000527897 CLDN2P57739 230 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 SHC2P98077 582 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 PIGHQ14442 188 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-213ENST00000527897 CYTH1Q15438 398 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 TSR1Q2NL82 804 aaKnown RBP15.76■□□□□ 0.11
CAPN1-213ENST00000527897 INAVAQ3KP66 663 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 INO80DQ53TQ3 878 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-213ENST00000527897 GDPD4Q6W3E5 623 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 PLPP6Q8IY26 295 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 CASKIN2Q8WXE0 1202 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 KLHDC7BQ96G42 594 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 LRIG1Q96JA1 1093 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 FEM1CQ96JP0 617 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 EIF3CQ99613 913 aaKnown RBP15.76■□□□□ 0.11
CAPN1-213ENST00000527897 CALN1Q9BXU9 219 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 OSBPL1AQ9BXW6 950 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 SP110Q9HB58 689 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms