RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CNPY3Q9BT09 278 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 TRIM62Q9BVG3 475 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 NACA2Q9H009 215 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.2□□□□□ -0.622e-6■■■■■ 42.9
NEDD8-204ENST00000526430 DDIT4Q9NX09 232 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 ELOVL2Q9NXB9 296 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 RRN3Q9NYV6 651 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 LSM7Q9UK45 103 aaKnown RBP11.2□□□□□ -0.62
NEDD8-204ENST00000526430 CLEC4EQ9ULY5 219 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 SNX10Q9Y5X0 201 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 A0A1W2PR77 199 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 ACSL4O60488 711 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 USP12O75317 370 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 KRT38O76015 456 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 MYF5P13349 255 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 IL1R2P27930 398 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 CD38P28907 300 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 ADRA1BP35368 520 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 CYLC1P35663 651 aaPredicted RBP11.19□□□□□ -0.62
NEDD8-204ENST00000526430 ARHGAP25P42331 645 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 IRAK1P51617 712 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 SGSHP51688 502 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 HADHBP55084 474 aaKnown RBP11.19□□□□□ -0.62
NEDD8-204ENST00000526430 INHBCP55103 352 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 NFKB2Q00653 900 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 TLE1Q04724 770 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 NME3Q13232 169 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 TTC31Q49AM3 519 aaPredicted RBP11.19□□□□□ -0.62
NEDD8-204ENST00000526430 PIK3R6Q5UE93 754 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 TXNRD3NBQ6F5E7 133 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 SERPINA13PQ6UXR4 307 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 ANKS1BQ7Z6G8 1248 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 C14orf80Q86SX3 495 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 FAM131BQ86XD5 332 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 CPXM2Q8N436 756 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 CCDC185Q8N715 623 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 FAM172AQ8WUF8 416 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 TRIM11Q96F44 468 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 MRPL47Q9HD33 250 aaKnown RBP11.19□□□□□ -0.62
NEDD8-204ENST00000526430 PLK2Q9NYY3 685 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 TRIM10Q9UDY6 481 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 STAP1Q9ULZ2 295 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 MAN2B2Q9Y2E5 1009 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 PAXBP1Q9Y5B6 917 aa11.19□□□□□ -0.62
NEDD8-204ENST00000526430 SYNJ2BP-COX16A0A087WUM0 186 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 BTNL10A8MVZ5 291 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 C10orf142B7Z368 130 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 FAM72CH0Y354 149 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 TIMM44O43615 452 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 LRCH4O75427 683 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 PAGE1O75459 146 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 LATS1O95835 1130 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 F9P00740 461 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 SDC4P31431 198 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 VAV2P52735 878 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 DEUP1Q05D60 604 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 BNIP3Q12983 259 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 ZNF211Q13398 564 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-204ENST00000526430 CDO1Q16878 200 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 C5orf22Q49AR2 442 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 MS4A13Q5J8X5 152 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 ADGRF1Q5T601 910 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 FAM72AQ5TYM5 149 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 FYB2Q5VWT5 728 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 FAM72DQ6L9T8 149 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 DCUN1D2Q6PH85 259 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 USP30Q70CQ3 517 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 FAM72BQ86X60 149 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 UNC45BQ8IWX7 931 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 NIPA2Q8N8Q9 360 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 ZNF564Q8TBZ8 553 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-204ENST00000526430 PRICKLE1Q96MT3 831 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-204ENST00000526430 TKTL2Q9H0I9 626 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 TMEM245Q9H330 911 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 WDCPQ9H6R7 721 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 COX16Q9P0S2 106 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 UVRAGQ9P2Y5 699 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 NEU3Q9UQ49 428 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 HS3ST4Q9Y661 456 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 SCINQ9Y6U3 715 aa11.18□□□□□ -0.62
NEDD8-204ENST00000526430 A0A0A6YYK5 440 aaPredicted RBP11.17□□□□□ -0.62
NEDD8-204ENST00000526430 OPA1O60313 960 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 CSO75390 466 aaKnown RBP11.17□□□□□ -0.62
NEDD8-204ENST00000526430 DNTTP04053 509 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 GP1BAP07359 652 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 PSMA2P25787 234 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 MIPP30301 263 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 CCR1P32246 355 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 MLLT3P42568 568 aaPredicted RBP11.17□□□□□ -0.62
NEDD8-204ENST00000526430 RIPPLY3P57055 190 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 NXPH1P58417 271 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 TAS2R40P59535 323 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 RPS14P62263 151 aaKnown RBP11.17□□□□□ -0.62
NEDD8-204ENST00000526430 CA9Q16790 459 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 ATP13A4Q4VNC1 1196 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 BRMS1LQ5PSV4 323 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 MANEALQ5VSG8 457 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 NUGGCQ68CJ6 796 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 RFWD3Q6PCD5 774 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 PYROXD2Q8N2H3 581 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms