RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 C3orf38Q5JPI3 329 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 BRMS1LQ5PSV4 323 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 KIAA1614Q5VZ46 1190 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 EFL1Q7Z2Z2 1120 aaKnown RBP14.54□□□□□ -0.08
CPSF1-201ENST00000526271 SLC35F3Q8IY50 421 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 FAM71AQ8IYT1 594 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 NETO2Q8NC67 525 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 OR6K2Q8NGY2 324 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 C1orf74Q96LT6 269 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 SLC46A1Q96NT5 459 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 DEPDC7Q96QD5 511 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 BOCQ9BWV1 1114 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 CLPBQ9H078 707 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 WDCPQ9H6R7 721 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.54□□□□□ -0.08
CPSF1-201ENST00000526271 RABGEF1Q9UJ41 708 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 ANKRD36A6QL64 1941 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 UNC13CQ8NB66 2214 aa14.54□□□□□ -0.08
CPSF1-201ENST00000526271 FLNCQ14315 2725 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 ILVBLA1L0T0 632 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 EME2A4GXA9 379 aaPredicted RBP14.53□□□□□ -0.08
CPSF1-201ENST00000526271 FAM72CH0Y354 149 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 KLK10O43240 276 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 AP1G1O43747 822 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 IGFALSP35858 605 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 NEK3P51956 506 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 ERVPABLB-1P60509 514 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 EXOC3L4Q17RC7 722 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 CARD16Q5EG05 197 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 LRRC73Q5JTD7 316 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 MIIPQ5JXC2 388 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 FAM72AQ5TYM5 149 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 FAM72DQ6L9T8 149 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 NLRP14Q86W24 1093 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 FAM72BQ86X60 149 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 MAPK15Q8TD08 544 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 KCNE4Q8WWG9 221 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 CENPTQ96BT3 561 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 CFAP57Q96MR6 1250 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 LENG8Q96PV6 779 aaPredicted RBP14.53□□□□□ -0.08
CPSF1-201ENST00000526271 PPP1R9BQ96SB3 815 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 HEPHQ9BQS7 1158 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 TM6SF2Q9BZW4 377 aa14.53□□□□□ -0.08
CPSF1-201ENST00000526271 CPED1A4D0V7 1026 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 GTPBP10A4D1E9 387 aaKnown RBP14.52□□□□□ -0.09
CPSF1-201ENST00000526271 GOLGA6L22H0YM25 854 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 AREL1O15033 823 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 AQP9O43315 295 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 OR1E1P30953 314 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 TMPRSS3P57727 454 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 HNRNPKP61978 463 aaKnown RBP eCLIP14.52□□□□□ -0.09
CPSF1-201ENST00000526271 RPS21P63220 83 aaKnown RBP14.52□□□□□ -0.09
CPSF1-201ENST00000526271 GNA12Q03113 381 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 DEUP1Q05D60 604 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 CLN3Q13286 438 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 C1orf61Q13536 156 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 PDE1CQ14123 709 aaPredicted RBP14.52□□□□□ -0.09
CPSF1-201ENST00000526271 SLC25A52Q3SY17 297 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 KIAA1161Q6NSJ0 714 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 ZCCHC8Q6NZY4 707 aaKnown RBP14.52□□□□□ -0.09
CPSF1-201ENST00000526271 LEKR1Q6ZMV7 388 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 GBP6Q6ZN66 633 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 PARGQ86W56 976 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 FAM131BQ86XD5 332 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 PCDH20Q8N6Y1 951 aaKnown RBP14.52□□□□□ -0.09
CPSF1-201ENST00000526271 WBP1Q96G27 269 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 SPON2Q9BUD6 331 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 LRRC61Q9BV99 259 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 NAA15Q9BXJ9 866 aaKnown RBP14.52□□□□□ -0.09
CPSF1-201ENST00000526271 KLC2Q9H0B6 622 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 NOL6Q9H6R4 1146 aaKnown RBP14.52□□□□□ -0.09
CPSF1-201ENST00000526271 ATP13A1Q9HD20 1204 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 MBNL1Q9NR56 388 aaKnown RBP14.52□□□□□ -0.09
CPSF1-201ENST00000526271 FHOD1Q9Y613 1164 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 CSNK1G3Q9Y6M4 447 aa14.52□□□□□ -0.09
CPSF1-201ENST00000526271 ARHGEF17Q96PE2 2063 aaPredicted RBP14.51□□□□□ -0.09
CPSF1-201ENST00000526271 C16orf96A6NNT2 1141 aa14.51□□□□□ -0.09
CPSF1-201ENST00000526271 SRGAP2O75044 1071 aa14.51□□□□□ -0.09
CPSF1-201ENST00000526271 GJB6O95452 261 aa14.51□□□□□ -0.09
CPSF1-201ENST00000526271 JUNDP17535 347 aa14.51□□□□□ -0.09
CPSF1-201ENST00000526271 RHDQ02161 417 aa14.51□□□□□ -0.09
CPSF1-201ENST00000526271 B3GNT8Q7Z7M8 397 aa14.51□□□□□ -0.09
CPSF1-201ENST00000526271 NOP9Q86U38 636 aaKnown RBP14.51□□□□□ -0.09
CPSF1-201ENST00000526271 DRC7Q8IY82 874 aa14.51□□□□□ -0.09
CPSF1-201ENST00000526271 EMC1Q8N766 993 aa14.51□□□□□ -0.09
CPSF1-201ENST00000526271 LMX1AQ8TE12 382 aa14.51□□□□□ -0.09
CPSF1-201ENST00000526271 DUSP23Q9BVJ7 150 aa14.51□□□□□ -0.09
CPSF1-201ENST00000526271 CEP44Q9C0F1 390 aa14.51□□□□□ -0.09
CPSF1-201ENST00000526271 ZDHHC6Q9H6R6 413 aa14.51□□□□□ -0.09
CPSF1-201ENST00000526271 USP29Q9HBJ7 922 aa14.51□□□□□ -0.09
CPSF1-201ENST00000526271 HECAQ9UBI9 543 aaPredicted RBP14.51□□□□□ -0.09
CPSF1-201ENST00000526271 RWDD2AQ9UIY3 292 aa14.51□□□□□ -0.09
CPSF1-201ENST00000526271 J3QKU1 62 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 K7ENP7 123 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 NTN3O00634 580 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-201ENST00000526271 NOBOXO60393 691 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 CYP11B1P15538 503 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 SCNN1AP37088 669 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 RABIFP47224 123 aa14.5□□□□□ -0.09
CPSF1-201ENST00000526271 PTK2Q05397 1052 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms