RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 C22orf39Q6P5X5 142 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 ZNF783Q6ZMS7 281 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 DPY19L3Q6ZPD9 716 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 BPHLQ86WA6 291 aaPredicted RBP6.59□□□□□ -1.35
CD44-214ENST00000525211 CCDC13Q8IYE1 715 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 ZNF567Q8N184 647 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 TEX26Q8N6G2 289 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 FAM71DQ8N9W8 422 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 ATP11CQ8NB49 1132 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 CCNYQ8ND76 341 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 OR2A12Q8NGT7 310 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 SPATA22Q8NHS9 363 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 ARRDC2Q8TBH0 407 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 CCDC110Q8TBZ0 833 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.59□□□□□ -1.35
CD44-214ENST00000525211 P3H4Q92791 437 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 ARRDC3Q96B67 414 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 HDAC11Q96DB2 347 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 PBKQ96KB5 322 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 HHIPQ96QV1 700 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 IL12RB2Q99665 862 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 GABRG3Q99928 467 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 HINFPQ9BQA5 517 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 TMEM121Q9BTD3 319 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 MAK16Q9BXY0 300 aaKnown RBP6.59□□□□□ -1.35
CD44-214ENST00000525211 MKRN2Q9H000 416 aaKnown RBP6.59□□□□□ -1.35
CD44-214ENST00000525211 CHRDQ9H2X0 955 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 NT5MQ9NPB1 228 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 RRAGDQ9NQL2 400 aaPredicted RBP6.59□□□□□ -1.35
CD44-214ENST00000525211 RBM22Q9NW64 420 aaKnown RBP eCLIP6.59□□□□□ -1.35
CD44-214ENST00000525211 SEPT10Q9P0V9 454 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 UBA2Q9UBT2 640 aaPredicted RBP6.59□□□□□ -1.35
CD44-214ENST00000525211 SERGEFQ9UGK8 458 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 EBF1Q9UH73 591 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 MMP17Q9ULZ9 603 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 HS3ST2Q9Y278 367 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 INVSQ9Y283 1065 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 EFR3BQ9Y2G0 817 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.59□□□□□ -1.35
CD44-214ENST00000525211 SIT1Q9Y3P8 196 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 NEU2Q9Y3R4 380 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 WASF2Q9Y6W5 498 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 NUMA1Q14980 2115 aa6.59□□□□□ -1.35
CD44-214ENST00000525211 TCRBV7S3A2A0A539 114 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 CHURC1-FNTBB4DL54 471 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 SPINT1O43278 529 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 ZNF500O60304 480 aaPredicted RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 URI1O94763 535 aaPredicted RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 TJP3O95049 919 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 PRLP01236 227 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 EPHX1P07099 455 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 CCNB1P14635 433 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 PRLRP16471 622 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 GABRG2P18507 467 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 AOC1P19801 751 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 CCNCP24863 283 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 NTSR1P30989 418 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 PTGIRP43119 386 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 TERF1P54274 439 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 RPS14P62263 151 aaKnown RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 MRPS21P82921 87 aaKnown RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 SKOR1P84550 965 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 TRAF2Q12933 501 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 SRSF5Q13243 272 aaKnown RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 CAMK2GQ13555 558 aaPredicted RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 DMC1Q14565 340 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 TRIP13Q15645 432 aaPredicted RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 CRY1Q16526 586 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 HNRNPA1L2Q32P51 320 aaKnown RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 ACCSLQ4AC99 568 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 ODF2Q5BJF6 829 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 SLC45A4Q5BKX6 768 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 LRRC73Q5JTD7 316 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 SYCP2LQ5T4T6 812 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 TMCO4Q5TGY1 634 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 DARS2Q6PI48 645 aaKnown RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 KDM7AQ6ZMT4 941 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 PRPF39Q86UA1 669 aaKnown RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 CHPFQ8IZ52 775 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 ATPAF2Q8N5M1 289 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 LZTR1Q8N653 840 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 ACTRT1Q8TDG2 376 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 TFB1MQ8WVM0 346 aaKnown RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 NKD2Q969F2 451 aaPredicted RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 FUBP1Q96AE4 644 aaKnown RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 MSANTD3Q96H12 275 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 OXNAD1Q96HP4 312 aaPredicted RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 AGAP3Q96P47 875 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 MLPHQ9BV36 600 aaPredicted RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 C2orf49Q9BVC5 232 aaPredicted RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 DDX47Q9H0S4 455 aaKnown RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 CAAP1Q9H8G2 361 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 SP110Q9HB58 689 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 NOD2Q9HC29 1040 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 UBP1Q9NZI7 540 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 TTC7AQ9ULT0 858 aaPredicted RBP6.58□□□□□ -1.36
CD44-214ENST00000525211 ATP8A1Q9Y2Q0 1164 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 SAR1BQ9Y6B6 198 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 CKAP5Q14008 2032 aa6.58□□□□□ -1.36
CD44-214ENST00000525211 WDFY4Q6ZS81 3184 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms