RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 NEK3P51956 506 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 NDST2P52849 883 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 RHOAP61586 193 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 SIM1P81133 766 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 CCDC15Q0P6D6 951 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 FOXC1Q12948 553 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 TRIM14Q14142 442 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 PIGHQ14442 188 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 ACAP1Q15027 740 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 SEL1L3Q68CR1 1132 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 NAPEPLDQ6IQ20 393 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 FBXL19Q6PCT2 694 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 ARHGAP36Q6ZRI8 547 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 PARS2Q7L3T8 475 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 CPNE8Q86YQ8 564 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 NAXDQ8IW45 347 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 TP53INP2Q8IXH6 220 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 PLPP6Q8IY26 295 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 EXOC2Q96KP1 924 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 KLHL32Q96NJ5 620 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 DNAJC7Q99615 494 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 CHP1Q99653 195 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 NCAPGQ9BPX3 1015 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 DEF6Q9H4E7 631 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 FZD3Q9NPG1 666 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 ZNHIT6Q9NWK9 470 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 UBA2Q9UBT2 640 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 IP6K2Q9UHH9 426 aa13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 ZFR2Q9UPR6 939 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 TP53BP1Q12888 1972 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-205ENST00000525079 CACNA1EQ15878 2313 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 CXorf51AA0A1B0GTR3 108 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 ARHGAP42A6NI28 874 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 C16orf96A6NNT2 1141 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 EIF3CLB5ME19 914 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 H3BRJ5 948 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 MYO1FO00160 1098 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 INSIG1O15503 277 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 UGT2B4P06133 528 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 TPM1P09493 284 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 SPINK2P20155 84 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 PMLP29590 882 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 GJC1P36383 396 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 ABL2P42684 1182 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 STAT4Q14765 748 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 SLC18A3Q16572 532 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 ZNF423Q2M1K9 1284 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 TSR1Q2NL82 804 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 ASTE1Q2TB18 679 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 ZNF284Q2VY69 593 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 SETMARQ53H47 684 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 BOLA3Q53S33 107 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 INO80DQ53TQ3 878 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 SLC45A4Q5BKX6 768 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 ZNF805Q5CZA5 627 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 LRRC73Q5JTD7 316 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 GDPD4Q6W3E5 623 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 HORMAD1Q86X24 394 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 PSTKQ8IV42 348 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 ARHGAP12Q8IWW6 846 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 NPWQ8N729 165 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 ZNF564Q8TBZ8 553 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 CASKIN2Q8WXE0 1202 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 VOPP1Q96AW1 172 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 SKA1Q96BD8 255 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 GDAP1L1Q96MZ0 367 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 EIF3CQ99613 913 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 ABHD10Q9NUJ1 306 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 ETNK2Q9NVF9 386 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 CTTNBP2NLQ9P2B4 639 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 LHX3Q9UBR4 397 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 BTBD3Q9Y2F9 522 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 PCDHB9Q9Y5E1 797 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 FADS3Q9Y5Q0 445 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 SPTBN2O15020 2390 aa13.04□□□□□ -0.32
TRAPPC4-205ENST00000525079 PRAMEF26H0Y7S4 382 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 TLR4O00206 839 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 AKR1B10O60218 316 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 PRAMEF11O60813 436 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 MFAP3LO75121 409 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 IGSF6O95976 241 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 ZNF883P0CG24 379 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 ITIH2P19823 946 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 ARL4AP40617 200 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 HCAR3P49019 387 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 SLC25A11Q02978 314 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 DPYSQ14117 519 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 TRIP6Q15654 476 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 DPYSL2Q16555 572 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 ATP13A4Q4VNC1 1196 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 AFMIDQ63HM1 303 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 NEK5Q6P3R8 708 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 POLNQ7Z5Q5 900 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 SPATS2Q86XZ4 545 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 GATAD2AQ86YP4 633 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 NIPA2Q8N8Q9 360 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 MFSD2AQ8NA29 543 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 RHBDD1Q8TEB9 315 aa13.03□□□□□ -0.32
TRAPPC4-205ENST00000525079 CTNNBL1Q8WYA6 563 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms